Candidatus Filomicrobium marinum W: BN1229_v1_3429
Help
Entry
BN1229_v1_3429 CDS
T03856
Name
(GenBank) putative DNA repair protein HYPDE_32338
KO
K10979
DNA end-binding protein Ku
Organism
fil
Candidatus Filomicrobium marinum W
Pathway
fil03450
Non-homologous end-joining
Brite
KEGG Orthology (KO) [BR:
fil00001
]
09120 Genetic Information Processing
09124 Replication and repair
03450 Non-homologous end-joining
BN1229_v1_3429
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
fil03400
]
BN1229_v1_3429
DNA repair and recombination proteins [BR:
fil03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
Two-component NHEJ DNA repair complex
BN1229_v1_3429
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Ku
Motif
Other DBs
NCBI-ProteinID:
CFX50860
UniProt:
A0A0D6JGN4
LinkDB
All DBs
Position
1:3345765..3346712
Genome browser
AA seq
315 aa
AA seq
DB search
MVAVRTFWKGHMRLALVTIPIRLVSAISSEEKISFHQVDRKTKQRIRYKKVAGEGGREVP
SQDISYGYEVEPGNYVLFDNDELDALKLSSRHTIELTEFVDAFSINPLYFDRPYYILPDG
EVAEEGYCVIRDALQSAKKCGIGQIAMRGKENLIALMPAGNGLMLETLRYDSDVRDADDI
FSGLGTQKFRPGLIDMAKQLIEERSTEFDPSAYKDHYAETVREFVKEKLAGGETVAVSSG
EEAATGAGTVIDFMEALKRSVEKAPAKKGGRSEPKRAAAASTKRDPVKRSKAPEKSAGRG
SSGSKGRSATTKKKA
NT seq
948 nt
NT seq
+upstream
nt +downstream
nt
atggttgcggtccgcacattttggaaagggcacatgcgccttgcgctggtgaccatcccc
atcaggctggtcagcgcgatatcgtccgaagaaaagatatcattccatcaagtggaccgc
aaaacgaagcagcggatccgatacaaaaaggtagccggagagggtgggcgcgaagtcccc
tcacaggacatctcctacggttatgaagtcgagcccggcaactatgtgttgtttgacaac
gacgagcttgacgcgctgaagctttcctcgcgccatacgatcgagttgacggagttcgtg
gacgcgttctcgatcaatccgctctatttcgaccggccttattatatccttccggacggc
gaggtggcggaagagggttattgcgtaattcgcgacgcgcttcagagcgcaaaaaaatgc
ggaattgggcagatcgccatgcgcggcaaggaaaaccttatcgctctcatgccggccgga
aacgggctcatgctcgagacccttcgttatgacagcgatgtgcgcgacgcggatgacatc
ttttccggactcggaacgcagaaatttcggcctggcctgattgatatggcgaagcagctc
attgaagagcggtcgaccgagtttgatcccagcgcctacaaagatcattacgccgaaacg
gttcgagagttcgtcaaagaaaagctcgctggcggcgaaacggttgcggtcagtagtggc
gaagaagcggccaccggtgcgggtaccgtcatcgacttcatggaggcactcaagcgctcg
gtcgagaaggctcctgccaaaaagggcggtcggtcagagccgaaacgcgcggcggcagcc
tcgacaaagcgcgatcccgtaaagcgatccaaagcacctgagaaatcagctggccgaggc
tcttccggctcaaagggccgatccgcaacgacgaagaaaaaagcgtga
DBGET
integrated database retrieval system
