Candidatus Filomicrobium marinum W: BN1229_v1_3516
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Entry
BN1229_v1_3516 CDS
T03856
Name
(GenBank) Polynucleotide adenylyltransferase
KO
K00970
poly(A) polymerase [EC:
2.7.7.19
]
Organism
fil
Candidatus Filomicrobium marinum W
Pathway
fil03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
fil00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
BN1229_v1_3516
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
fil03019
]
BN1229_v1_3516
Enzymes [BR:
fil01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.19 polynucleotide adenylyltransferase
BN1229_v1_3516
Messenger RNA biogenesis [BR:
fil03019
]
Prokaryotic type
Bacterial mRNA degradation factors
Other RNA degradation factors
Others
BN1229_v1_3516
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PolyA_pol
PolyA_pol_RNAbd
Motif
Other DBs
NCBI-ProteinID:
CFX52862
UniProt:
A0A0D6JH01
LinkDB
All DBs
Position
1:3430923..3432206
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AA seq
427 aa
AA seq
DB search
MQGDRDRPNSDAGLPNLAGADWLNSAGIQAVFDALERGGYSARAVGGVVRNALLGEPIHD
VDIATTAEPDHVMRLVQAAGLKGIATGAAHGTITVISSHVPFEVTTLRRDVETFGRHATV
AFTTEWEEDARRRDFTLNALYCDRKGQVYDPVGGYADLLARRVRFIGDPVARIREDYLRI
LRFFRFQATYGIGDCDGEGLAACIAERDGLTRLSGERVRSEILRLLVAVGVLPVVDVIVR
SGIGEIVFGRKGDVASLSHVAEIERALERSPDAILRLAALACSTLDEANALADRLRLSNL
ERGQLEAAVLTDPALGPEANLARAKACRFRLSLDAFQRAYIMTWARSAAGAADEAWHVRF
HELSTWNVPEVPFKGSDVVALGVPPGPNVGIVLRQFQDWWIAADFPDDDAQLHHHLATVA
RPYIANA
NT seq
1284 nt
NT seq
+upstream
nt +downstream
nt
atgcagggtgatcgagatcggccgaactccgacgctggtctgcccaaccttgctggcgct
gactggttgaactcggccggaattcaagcagtgttcgacgcccttgagagaggaggatat
tcggcgcgcgccgttggcggcgttgtgcgcaatgccctgttaggtgaaccaatccatgac
gtcgatattgctacgacggccgaacccgaccacgtgatgcggctggtccaggctgcaggt
ctcaaaggcatcgcgacgggtgcagcacacggaacaattacagttatctccagccacgtg
cccttcgaagtcacgacgctccggcgtgatgtggaaacattcggccgtcacgcaaccgtc
gcgttcacaaccgaatgggaggaagacgcccgtagacgcgacttcaccctcaacgcgctc
tactgcgatcgtaagggacaagtttatgatcctgtcggcggctacgcagacctcctcgca
cggcgcgtacgtttcattggggatcccgtcgcgcgcatccgagaagattatttgcgcatt
ctgcgattcttccgttttcaagcgacgtacggcatcggcgattgcgacggcgaagggctg
gcagcatgtatcgccgagcgagatgggctgacgcgcttatcgggagaacgcgtccgctct
gagattttgcgtttgctggttgctgttggcgtgttgcccgttgtcgatgtcattgttcgc
tcgggaatcggcgaaatcgttttcggccgaaagggcgacgtcgcttctctctcacatgtc
gccgagatcgaacgcgccttagagcgaagtcccgatgctatcctgcgtttggcggcgctc
gcctgttccacattggacgaggccaatgccttggctgaccgcctaaggctctccaattta
gagcgcggccaacttgaagccgctgtgctgacagatccagcccttgggcccgaagctaat
cttgcgcgtgcgaaagcctgccgcttccggctctcactcgatgcattccaacgagcatac
attatgacatgggctcgatccgcagccggtgcggccgatgaagcttggcacgtacgcttc
catgaactctcgacgtggaatgttccggaggtgcctttcaaaggttccgacgttgtcgcg
ctcggcgtgccccctggacccaacgtcggtatcgtcctgcggcaatttcaggactggtgg
atcgccgccgattttccggatgatgacgcgcagcttcatcatcacctcgcaacagtcgca
aggccctacattgcgaatgcctga
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