Candidatus Filomicrobium marinum W: BN1229_v1_3524
Help
Entry
BN1229_v1_3524 CDS
T03856
Symbol
yjgR
Name
(GenBank) putative ATPase
KO
K06915
DNA double-strand break repair helicase HerA and related ATPase
Organism
fil
Candidatus Filomicrobium marinum W
Brite
KEGG Orthology (KO) [BR:
fil00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
fil03400
]
BN1229_v1_3524 (yjgR)
DNA repair and recombination proteins [BR:
fil03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
Archaeal homologous recombinant proteins
BN1229_v1_3524 (yjgR)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
HerA_C
DUF87
FtsK_SpoIIIE
AAA_22
AAA_10
ResIII
SLFN-g3_helicase
AAA_30
TrwB_AAD_bind
T2SSE
AAA_16
nSTAND3
AAA_7
AAA_19
CbiA
AAA_28
Motif
Other DBs
NCBI-ProteinID:
CFX53053
UniProt:
A0A0D6JG45
LinkDB
All DBs
Position
1:complement(3438388..3439878)
Genome browser
AA seq
496 aa
AA seq
DB search
MSQSVLQDGKIYLGTSVKPEYLDLKLANRHGLITGATGTGKTVTLQVLAEGFSKNGVPVF
AADIKGDLSGIAKAGEPKDFIVKRNEKIGLTEYQNQAYPTVFWDVFGKSGHPIRTTILDM
GPLLLSRMLELNEVQEGVLNVAFRVAEEEKLPLLDLKDLRAQIHNIGERGKELSMKYGNV
ATASIGAIQRRLLVLEEQGADQFFGEPALDINDFMRVSMDGRGIVNLLAADQLMQKPRLY
GTFLLWMLTKLWQTLPEVGDQPKPKLVFFFDEAHLLFDEAPKPLLQRIEQVARLIRSKGV
GVYFITQNPLDVPDSVSSQLGNRIQHQLRAFTPKEQRAVKTAAETFRPNPDIDTERTILD
LGIGEALVSMLENKGEPSMVQRTLIRPPEGQIGPLTDEERATLMKRSPVDGKYDEAVDRE
SAHEILAKRAEELAAKEAELQKQANSGGTGSWLGNVIFGRGPRGGKSLGEQAVSYASKSI
MRRLVNTLVRSIMRGR
NT seq
1491 nt
NT seq
+upstream
nt +downstream
nt
atgagccaatcggttctccaggatggcaagatctatctcggaaccagcgttaagcccgag
tatctcgatctcaaattggcgaaccgccacggcttgattactggagcgacgggtaccggt
aaaacggtgaccttgcaggtgttggccgaaggcttctccaagaatggcgtccctgttttc
gctgccgatatcaagggcgacttatctggcatagcaaaagccggtgagccgaaggatttc
attgtcaaacgcaatgaaaagatcggcctgacggaataccagaatcaagcctatcccacc
gttttttgggatgtcttcggcaaatcggggcatccgatccgcacgaccatcctagacatg
gggccgctgcttctctcgcgcatgctggaactcaatgaagtccaggaaggcgtcctcaat
gtcgcgttccgtgtcgctgaagaagagaaacttcctctgctcgatctgaaagatttgcgc
gcgcagatacacaacatcggcgagcgcggcaaagagctctcgatgaagtacgggaacgtt
gcgaccgcatcgatcggtgcgatccagaggcgtctgctggttttggaggagcaaggggcc
gaccaatttttcggcgaaccggcgctcgatataaacgacttcatgcgcgtcagcatggat
ggtcgcggtatagtgaatttgctggctgcagatcagctcatgcaaaagccccggctttac
ggcacgttcctgctgtggatgctgacgaaactctggcagacgctgccggaagttggcgat
cagccgaagcccaagctggttttctttttcgacgaagcgcatctgctgtttgatgaagct
ccaaaaccccttctccagcgcattgagcaagtcgcgcgtctcattcgttcgaagggcgtc
ggcgtttacttcattacgcaaaacccgctcgacgtccctgacagcgtttcttcgcagctc
ggcaaccgcattcagcatcagttgcgcgcgttcactcctaaggaacagcgggcagtcaag
acagcggcagaaaccttcaggccaaacccggacatcgataccgagcgcacgatccttgat
ctcggcatcggtgaagcgctcgtttcgatgcttgaaaataagggcgaaccgtcaatggtg
cagcggacattgatccgtccgccggaaggtcagattggcccactcacagacgaggaacgc
gcaacgctcatgaagcgtagtcccgtcgacggcaaatatgatgaggcggttgatcgcgaa
agcgcccatgagatcttggcgaagcgtgctgaagagctcgcggccaaggaggctgaactg
caaaaacaggcgaactccggaggcacaggcagctggctggggaacgtcattttcggtcgc
ggcccacgcggtggtaagtcgcttggtgaacaagccgtcagctatgcaagcaagtcgatc
atgcgtcggctcgtaaatacgctggtgcgctcgatcatgcgagggcgctga
DBGET
integrated database retrieval system
