Candidatus Filomicrobium marinum W: BN1229_v1_3652
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Entry
BN1229_v1_3652 CDS
T03856
Name
(GenBank) Rare lipoprotein A (fragment)
KO
K03642
peptidoglycan lytic transglycosylase [EC:
4.2.2.29
]
Organism
fil
Candidatus Filomicrobium marinum W
Brite
KEGG Orthology (KO) [BR:
fil00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01011 Peptidoglycan biosynthesis and degradation proteins [BR:
fil01011
]
BN1229_v1_3652
Enzymes [BR:
fil01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.2 Acting on polysaccharides
4.2.2.29 peptidoglycan lytic transglycosylase
BN1229_v1_3652
Peptidoglycan biosynthesis and degradation proteins [BR:
fil01011
]
Peptidoglycan biosynthesis and degradation
Lytic transglycosylase
BN1229_v1_3652
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DPBB_1
Motif
Other DBs
NCBI-ProteinID:
CFX55928
LinkDB
All DBs
Position
1:complement(3572148..3572693)
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AA seq
181 aa
AA seq
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MNGAGWIAKAASLAVCATLVSGCASGGSTISQGFTPSKFGTPASARVHYGEGTTPVRRGV
YKIGNPYYVGGQRYVPRHEPNYDKVGIASWYGSDFHGRLTANGEIYDQNRLTAAHPTLPL
PSNVRVTNMTNGRSIVVRVNDRGPFLHDRVIDLSRSAAHHLGFANKGLAKVRVTYLGPAP
L
NT seq
546 nt
NT seq
+upstream
nt +downstream
nt
atgaacggggcaggttggatagcaaaagccgcttctcttgcggtttgcgcaactttggtg
agtggatgtgcttcaggcggaagcacaatcagtcagggatttacgccatcaaaattcggt
actccggcaagcgcgcgggtacactacggcgaaggcaccacaccagtacgccgcggtgtc
tacaagatcggcaacccctactatgtcgggggacagcgctacgtgccacgccacgagcca
aactacgacaaagttggcatagcgtcttggtatggcagtgatttccacggacgcctaaca
gccaacggcgaaatttacgatcagaatcgcctcaccgcagcacatcctacgttgccgcta
ccatcgaacgttcgcgtaacgaacatgacgaatgggcgctccattgtcgtgcgcgtgaat
gaccgcggccccttccttcatgatcgagtaatagacttatctcgatctgcagcacatcat
ctgggttttgcaaataaaggacttgcaaaagtacgagtcacgtatcttggccccgcccct
ctataa
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