Candidatus Filomicrobium marinum W: BN1229_v1_3941
Help
Entry
BN1229_v1_3941 CDS
T03856
Symbol
rnd
Name
(GenBank) Ribonuclease D
KO
K03684
ribonuclease D [EC:
3.1.13.5
]
Organism
fil
Candidatus Filomicrobium marinum W
Brite
KEGG Orthology (KO) [BR:
fil00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
fil03016
]
BN1229_v1_3941 (rnd)
Enzymes [BR:
fil01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.13 Exoribonucleases producing 5'-phosphomonoesters
3.1.13.5 ribonuclease D
BN1229_v1_3941 (rnd)
Transfer RNA biogenesis [BR:
fil03016
]
Prokaryotic type
3'processing and CCA adding factors
3'processing factors
BN1229_v1_3941 (rnd)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol_A_exo1
HRDC
Motif
Other DBs
NCBI-ProteinID:
CFX62238
UniProt:
A0A0D6JLH9
LinkDB
All DBs
Position
1:complement(3833464..3834633)
Genome browser
AA seq
389 aa
AA seq
DB search
MKLITTPSALHELCHTLSSADFITVDTEFMREQTYWPKLCLIQVASDDVEAIIDPLAPDL
DLTPLWSLMTDSKIMKVFHAARQDIEIVHIAAGRVPSPVFDTQVAAMVCGFGESISYINL
TKKITGADLDKSSRFTDWSRRPLSEKQLNYALGDVTHLRDIYRHLKNELETTGRASWLDE
EMGTLTASETYEQNPETAWRRLKLKVRNRKALGVLMELAAWRETAAQNQDVPRQRIMRDD
ALYDIANQSPTSVEQLSGLRSLSDGFARSARAKEIVAAVRRGLDRDPSTVPPLSQGQPLS
AEATATLELLKVLLKSAAARHRVAPRLIADASDLERLARENEPDVAALTGWRRQLFGEDA
LRLKNGELALTLKAGDVRIVTTNDIRVET
NT seq
1170 nt
NT seq
+upstream
nt +downstream
nt
atgaaactcatcacgacgccctccgcccttcacgaactctgccacacgctctcgtccgcc
gatttcatcacggtcgacacggaatttatgcgtgaacagacctattggcccaagctgtgc
ctgattcaggtcgccagcgacgatgtcgaggcgatcattgatccgttggcgccggacttg
gatctgacgccgctctggtcgcttatgaccgacagcaagatcatgaaggtttttcatgcg
gcgcgtcaggacatcgagattgtccacatcgcggctggccgcgtgccgagccctgtgttt
gatacgcaggtcgctgccatggtctgtggcttcggagaatcaatcagctacatcaacctg
accaagaagattaccggcgctgacctcgacaaatcctcgcgcttcaccgattggtctcga
cggccactcagcgaaaaacagcttaactacgcgcttggagacgtcacgcacctgcgggat
atctatcggcatctgaaaaacgagcttgagacgacaggcagggcgtcttggctggatgag
gaaatggggaccctcaccgcttccgaaacctatgagcagaacccggaaaccgcttggcgg
cgcctaaaactcaaggtccgtaaccgcaaggccctgggcgtgttgatggagcttgccgcg
tggcgcgaaaccgcggcccaaaaccaggacgttccccgccaacggattatgcgcgatgac
gcgctttacgatatcgccaaccaatcgccgacgtcggtagaacaactctcgggattgcgc
tcactctccgatgggttcgcgcgatcggcccgcgccaaggagatcgtcgcagccgttcgt
cgcggcctcgatcgcgatccgtcgaccgtaccgccactaagtcaggggcaacccctgtcg
gcggaagcgacggccacactcgaactcctaaaagttctattgaaatcggctgctgcgcgt
catcgcgtggccccacgcctcatcgcagatgccagcgacctggaacgacttgcgcgcgaa
aacgagcctgacgtagcggcgttgacgggctggcgtcgtcagcttttcggtgaagacgcc
ctgcgattgaagaacggcgaactggctctaaccctgaaggccggagacgtgcgcatcgtg
accaccaacgatatccgcgttgaaacctga
DBGET
integrated database retrieval system
