Candidatus Filomicrobium marinum W: BN1229_v1_3942
Help
Entry
BN1229_v1_3942 CDS
T03856
Symbol
aspS
Name
(GenBank) Aspartate--tRNA ligase
KO
K01876
aspartyl-tRNA synthetase [EC:
6.1.1.12
]
Organism
fil
Candidatus Filomicrobium marinum W
Pathway
fil00970
Aminoacyl-tRNA biosynthesis
Brite
KEGG Orthology (KO) [BR:
fil00001
]
09120 Genetic Information Processing
09122 Translation
00970 Aminoacyl-tRNA biosynthesis
BN1229_v1_3942 (aspS)
09180 Brite Hierarchies
09181 Protein families: metabolism
01007 Amino acid related enzymes [BR:
fil01007
]
BN1229_v1_3942 (aspS)
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
fil03016
]
BN1229_v1_3942 (aspS)
03029 Mitochondrial biogenesis [BR:
fil03029
]
BN1229_v1_3942 (aspS)
Enzymes [BR:
fil01000
]
6. Ligases
6.1 Forming carbon-oxygen bonds
6.1.1 Ligases forming aminoacyl-tRNA and related compounds
6.1.1.12 aspartate---tRNA ligase
BN1229_v1_3942 (aspS)
Amino acid related enzymes [BR:
fil01007
]
Aminoacyl-tRNA synthetase
Class II (A)
BN1229_v1_3942 (aspS)
Transfer RNA biogenesis [BR:
fil03016
]
Eukaryotic type
Aminoacyl-tRNA synthetases (AARSs)
Multi-aminoacyl-tRNA synthetase complex (MSC)
BN1229_v1_3942 (aspS)
Prokaryotic type
Other AARSs
BN1229_v1_3942 (aspS)
Mitochondrial biogenesis [BR:
fil03029
]
Mitochondrial DNA transcription, translation, and replication factors
Mitochondrial transcription and translation factors
Other mitochondrial DNA transcription and translation factors
BN1229_v1_3942 (aspS)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
tRNA-synt_2
tRNA_anti-codon
GAD
Motif
Other DBs
NCBI-ProteinID:
CFX62259
UniProt:
A0A0D6JKN0
LinkDB
All DBs
Position
1:3834788..3836653
Genome browser
AA seq
621 aa
AA seq
DB search
MSRSGFKAASEAEADSTKLEEFQAMTHRYRTHTCGALRAADIGADVRLSGWVHRVRDHGG
VLFIDLRDHYGLTQVVADPDSAAFKVAESVRSEWVIRVDARVRARPEGTVNAELPTGEIE
LYATEIEVLSAAKELPVPVFGEPDYPEDLRLQYRFLDLRRETLHENIMRRLAVIKSMRRR
MEDAGFFEFSTPILTASSPEGARDFLVPSRLHVGKFYALPQAPQIYKQLLMVSGFDRYFQ
IAPCFRDEDPRADRLPGEFYQLDVEMSFVEQEEIFSTMEPIIRGVFEEFAEGRKVTETFP
RIAYDDAIAKYGSDKPDLRNPIEMQDVTEHFRGSGFKVFAGMIEKDPKVRVWAIPAPTGG
SRAFCDRMNSWAQGEGQPGLGYIFYRDEEAAGPIGKNIGPERSEAIRMQLGLKSGDAVFF
AAGTPSKFYKFAGAARDRIGQELKLIDEDRFALAWIVDFPMYEWNEDEKRIEFSHNPFSM
PQGGLAALEAATSDEDLLALKAYQYDIVCNGFEIASGGIRNHLPAAMVKAFSIAGLGPEV
VEQRFGGLYRAFQYGAPPHGGMAAGVDRMVMLLVDAKNLREVSLFPMNQQAQDLLMGAPG
DVDAKQLRELSLRVAVPPKAN
NT seq
1866 nt
NT seq
+upstream
nt +downstream
nt
atgtcgcggtccgggttcaaggccgcctcagaggctgaggcggattccaccaagttagag
gaatttcaagcgatgacacatcgctatcgtacgcatacatgcggcgcgttgcgtgccgcc
gatatcggggctgatgtgcggctttcgggctgggttcaccgcgtacgcgaccacggcggc
gtgctgttcatcgatttgcgtgaccactacgggcttacgcaggttgtcgccgatcctgac
agcgcagcgttcaaggttgccgaatcagttcgctctgaatgggttattcgggtggacgcc
cgcgtgcgggcacggccagagggaaccgtcaatgccgagctaccgaccggcgagatcgag
ctttatgcgaccgagatcgaagttttgtcggcagccaaggagcttccggtgccggttttc
ggtgagccggactatcccgaagacctgcgtttgcagtaccgcttcctcgatctgcgccgc
gagacgttgcatgaaaacatcatgcgccgtcttgctgtcatcaagtcgatgcggcggcgc
atggaagatgccggtttcttcgagttctcaacgcctattttgacagcctcttcgccggaa
ggggcgcgcgacttcctggtgccgtcgcgtctccatgtcggcaagttctacgcgcttccg
caggcgccgcagatctacaagcagctgttgatggtttcgggcttcgaccggtatttccag
attgcgccctgtttccgcgatgaagacccgcgcgcggaccggctcccaggcgagttctat
cagctcgacgtcgagatgagcttcgttgagcaagaagaaatcttctccacgatggagccg
atcatccgcggtgtgttcgaggaattcgctgagggtcgtaaggtcactgagacattcccg
aggatcgcgtacgacgacgccatcgccaaatacggcagtgacaagcccgacttgcgcaat
ccgatcgagatgcaggacgtgacggagcatttccgcggttctggtttcaaagtcttcgcg
gggatgatcgagaaggatccgaaggttcgcgtttgggctattccggcgccgacgggcggc
tcgcgtgcgttctgtgaccggatgaattcgtgggcgcaaggcgagggtcaacccggcctt
ggctacatcttctaccgtgacgaggaagcggccgggccgatcggcaagaacattggaccg
gaacggtcggaagccattcgcatgcagcttggtttgaagtcgggtgatgcggtgtttttc
gctgccggcacgccgtcgaagttctacaagttcgcgggcgcagccagagaccggatcggt
caggagttgaagctgatcgatgaggatcgctttgcccttgcctggatcgtcgatttcccg
atgtacgagtggaacgaagacgaaaagcggatcgagttttcgcacaacccgttttcgatg
cctcagggtggattggcggcgctggaagcggcgacctcggacgaggatctgctggcgctc
aaggcttatcagtacgacatcgtctgcaacggctttgagatcgcgtccggcggcatccgc
aaccatctgcctgcggcgatggtcaaggcgttctccatcgcggggctggggccggaagtc
gtcgagcagcggttcggcggtctttatcgtgcgttccagtacggtgcgcctccgcacggt
ggcatggccgcgggtgtcgatcgcatggtgatgctattggttgacgcgaagaacctgcgt
gaagtctcgttgttcccaatgaaccagcaggcgcaagatctgttgatgggcgctccgggc
gacgtggatgccaagcaactccgtgagctttcacttcgcgtcgcagtgccgccgaaagcg
aactag
DBGET
integrated database retrieval system
