Flavobacterium indicum: KQS_05370
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Entry
KQS_05370 CDS
T01781
Symbol
uvrD
Name
(GenBank) ATP-dependent DNA helicase UvrD
KO
K03657
ATP-dependent DNA helicase UvrD/PcrA [EC:
5.6.2.4
]
Organism
fin
Flavobacterium indicum
Pathway
fin03420
Nucleotide excision repair
fin03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
fin00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
KQS_05370 (uvrD)
03430 Mismatch repair
KQS_05370 (uvrD)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
fin03400
]
KQS_05370 (uvrD)
Enzymes [BR:
fin01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
KQS_05370 (uvrD)
DNA repair and recombination proteins [BR:
fin03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
KQS_05370 (uvrD)
MMR (mismatch excision repair)
Other MMR factors
KQS_05370 (uvrD)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrD-helicase
UvrD_C
AAA_19
UvrD_C_2
AAA_30
Viral_helicase1
PcrA_UvrD_tudor
ResIII
AAA_11
nSTAND3
DEAD
Motif
Other DBs
NCBI-ProteinID:
CCG53040
UniProt:
H8XV70
LinkDB
All DBs
Position
1183631..1185964
Genome browser
AA seq
777 aa
AA seq
DB search
MQHYIDQLNEAQRAPVLQKDGAMIVIAGAGSGKTRVLTMRIAYLMHQGVDAFNILALTFT
NKAAREMKNRIASIVGNNEAKNLWMGTFHSVFAKILRIESEKLGYPSNFTIYDTQDSVRL
IGQIIKEMQLDKDVYKPKQVLGRISQYKNSLITVRAYFNNPELQEADAMSKKPRMGEIYQ
NYVERCFKSGAMDFDDLLLKTNELLNRFPDVLAKYQDRFRYILVDEYQDTNHSQYLIVKA
LSDRFQNICVVGDDAQSIYAFRGANINNILNFQKDYDGVKMFRLEQNYRSSRNIVEAANN
VIDKNKTKLDKVVWTDNEDGPPIKVHRSLTDSEEGRFVASTIFEQKMQKQLPNNHFAVLY
RTNAQSRSIEDALRKRDIPYRIYGGLSFYQRKEIKDVLAYLRLVINPKDEEALVRVINYP
ARGIGDTTVEKLTVAANHYKRSIFEVMQHIDKIDLKLNSGTKQKLQDFVTMIQSFQVINE
NQDAFYLTDHVTKKTGLVQELKKDGTPEGIARIENIEELLNGIKDFTEGQKEIDGARGSL
AEFLEDVALATDLDNDTGDDDRVALMTIHLAKGLEFPHVFIVGLEEDLFPSAMSLNTRSE
LEEERRLFYVALTRAEHQAYLTYAQSRYRWGKLVDSEPSRFIEEIDDRYLDYLNPMDTNY
RYKPMMDIDIFGDVDKSKLRLNKPVAGTPPAYITSQEPISTANIRRLKPVNASSSSSKST
TIDSNLKIGAIVMHERFGKGEIVNLEGVGADKKAEIRFDVGGLKKLLLRFAKLDVIG
NT seq
2334 nt
NT seq
+upstream
nt +downstream
nt
atgcagcattacattgaccaattaaatgaagcacaacgcgcacctgttttacaaaaagac
ggcgctatgattgtaattgccggagcgggttctggtaaaactagggtgttaaccatgcgt
attgcttatttaatgcaccaaggcgtagatgcgtttaatattttggccttaacatttaca
aacaaggcggctcgtgaaatgaaaaatcgtattgcgagtattgtaggaaataatgaagcc
aaaaatctatggatgggaactttccattccgtttttgcaaaaatacttcgtatagaatct
gagaaattgggatatccttcaaatttcactatttatgatacacaggattcggttcgatta
attgggcaaatcattaaggaaatgcaattggataaagatgtgtacaaacctaagcaggtg
ttggggcgcatctcacaatataaaaactcactcataaccgtaagagcgtatttcaataat
cctgagttacaagaagcggatgctatgagtaagaaaccgcgaatgggggaaatttaccag
aattatgtggagcgttgttttaaatcgggcgccatggattttgatgatttattgttgaaa
accaatgaattattgaatcgttttcccgatgtgttggctaaataccaagaccgttttcgt
tacattttagtggatgagtaccaagataccaaccattcgcaatacttgattgtaaaagct
ttgtcggatcgattccaaaatatttgtgtagtaggagacgatgctcaaagtatctatgca
ttccgcggtgcgaatatcaacaatattttaaatttccaaaaagattatgacggagtaaaa
atgtttcgtttggagcagaattaccgttcctctcgaaatattgtggaagcggccaataat
gttattgataaaaataaaaccaaattagataaagttgtttggaccgataacgaagacggt
ccgcctataaaagtacatcgcagtttaaccgatagtgaggaaggtcgttttgtggcttcc
actatttttgaacaaaagatgcaaaaacaattgccaaataatcattttgcagtgttgtat
cgaacaaatgcacaatcgcgttccattgaagatgctttgcgtaagcgcgatattccttat
cgtatttatggaggattatcgttctatcaacgtaaagaaattaaggatgttttggcgtat
ttacgattggttattaatccgaaagatgaagaggctttagtacgtgttatcaattatcca
gcccgaggaattggagataccacagttgaaaaattaacggtagcagccaatcattataag
cgttcgatttttgaagtgatgcaacacatcgataaaatcgatttaaaactaaattcaggt
accaaacaaaagttgcaagattttgttacgatgattcagagttttcaagtaatcaatgaa
aatcaggatgcgttttatttaactgatcatgtgaccaagaaaaccggtttggtacaagaa
ttgaaaaaagacggaacacctgaaggtattgcacgtattgaaaatattgaagagttatta
aacggtattaaagattttacagaaggacaaaaagaaattgatggtgcacgtggttctttg
gctgaatttttagaagatgtagcactagcaaccgatttagataacgatacaggcgatgac
gatcgcgtggctttaatgaccattcacttagcaaaaggattagaatttccgcatgtgttc
attgtaggattagaggaagatttatttccaagtgctatgagtttaaatacccgaagtgag
ttagaagaagaacgtcgtttgttttatgttgcactaacgcgtgccgaacaccaagcctat
ttaacctatgcgcaatcgcgttaccgttggggtaaattagttgacagtgaaccatctcga
tttatagaagaaattgacgatcgatatttagattatttgaatccgatggataccaattat
cgttacaaacccatgatggatattgacatttttggggatgtagataaatcaaaattacgt
ttaaataaaccagttgcaggaacaccacccgcttatattacgagtcaagaaccaatttct
acagctaatattagaagattaaaaccggttaatgccagtagctcatcttcaaaaagtact
actatagacagtaatttaaaaattggagctattgttatgcacgaacgctttggtaaaggt
gaaattgtaaatttagaaggcgtgggtgccgataaaaaagcagaaattcgttttgatgtg
ggtgggttaaagaagttattgttacgttttgcaaagcttgacgtgattgggtaa
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