Flavobacterium indicum: KQS_07310
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Entry
KQS_07310 CDS
T01781
Symbol
phrB1
Name
(GenBank) Deoxyribodipyrimidine photolyase PhrB1
KO
K01669
deoxyribodipyrimidine photo-lyase [EC:
4.1.99.3
]
Organism
fin
Flavobacterium indicum
Brite
KEGG Orthology (KO) [BR:
fin00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
fin03400
]
KQS_07310 (phrB1)
Enzymes [BR:
fin01000
]
4. Lyases
4.1 Carbon-carbon lyases
4.1.99 Other carbon-carbon lyases
4.1.99.3 deoxyribodipyrimidine photo-lyase
KQS_07310 (phrB1)
DNA repair and recombination proteins [BR:
fin03400
]
Eukaryotic type
SSBR (single strand breaks repair)
Direct repair
KQS_07310 (phrB1)
Prokaryotic type
KQS_07310 (phrB1)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
FAD_binding_7
DNA_photolyase
Intu_longin_1
Motif
Other DBs
NCBI-ProteinID:
CCG53420
UniProt:
H8XQX2
LinkDB
All DBs
Position
1598229..1599515
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AA seq
428 aa
AA seq
DB search
MTIFWFRRDLRLEDNTALFHALNENEEVLPIFIFDTTILKHLDKQDARVSFIHQELNKIN
LKLKSIGKSLALFYGTPEEIFNQLIAENSIEAVYANHDYEPAARKRDKSVNELLKSNGIS
FKTCKDQVIFEKSEVVKEDGSPYVVYTPYSKKWLEKFKSIQLNNYPSETLTHKFTNHNYP
FLTLENIGFVPTSIRLPHFTIDEKRISNYEGTRNFPAIEGTSLIGIHLRFGTISIRKLVN
YVQNFSNVTYLKELIWREFFMQILWHFPHTTAKSFKEKYDAIEWLNNELDFNKWCEGKTG
YPFVDAGMRELNATGHMHNRVRMIVASFLCKHLLIDWRWGEAYFATKLLDYEQASNVGNW
QWAAGSGVDAAPYFRIFNPTEQIKKFDSELKYIKKWIPELNTSNYPEPIIEHKLARERCL
TTYKKAVG
NT seq
1287 nt
NT seq
+upstream
nt +downstream
nt
atgacaattttctggtttagacgcgatttacgtttagaagacaataccgctttatttcat
gccttaaatgaaaatgaggaagtattgccgatttttatattcgataccactattttaaaa
cacctagacaagcaagatgcccgtgtttcattcattcatcaagaacttaataaaattaat
ctaaaactaaaatctataggtaaaagtttagccttgttctatggtacaccagaagaaata
tttaatcaattaattgctgaaaattcaattgaagctgtttatgccaatcatgattatgaa
cccgctgcacgaaaaagagataaaagcgtaaatgaactattgaaatcaaacggtatttcg
tttaaaacttgtaaagatcaagtcatatttgagaaatctgaagtagttaaagaggatggc
tctccttatgtggtctataccccctattcaaaaaaatggttagaaaaattcaaatcaatt
caactgaataattatccttctgaaaccttaactcataaatttacaaaccataattatcct
tttttaactttagaaaatattggttttgtccccacttctattcgattgccacactttaca
attgatgaaaaacgtattagtaattatgaaggtacacgaaattttcctgctattgaaggt
acttctttaattggaattcatttaagatttggcaccatcagtattcgaaaattagttaat
tatgttcaaaatttttcaaacgttacatatttaaaagaattaatttggcgtgaatttttt
atgcaaatcctttggcattttcctcacacaacagctaaaagttttaaagaaaaatacgat
gccattgagtggctaaataatgaattagactttaataaatggtgtgaaggaaaaacagga
tatccatttgtagatgcagggatgcgcgaactcaatgcaaccggacacatgcacaatcgt
gttcgtatgattgtagccagttttttatgtaaacatttattaattgattggcgttggggt
gaagcttattttgctactaaacttttagattacgaacaagcaagtaatgtcgggaactgg
caatgggccgctggtagtggtgttgatgcagccccttattttagaatttttaatccgact
gaacaaataaaaaaatttgattcagagttaaaatatattaaaaaatggattccggagttg
aacacttcaaactatccagaacctataattgaacacaaactagcaagagaaagatgttta
actacgtataaaaaagccgttggataa
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