Flavobacterium indicum: KQS_07485
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Entry
KQS_07485 CDS
T01781
Symbol
recQ2
Name
(GenBank) ATP-dependent DNA helicase RecQ2
KO
K03654
ATP-dependent DNA helicase RecQ [EC:
5.6.2.4
]
Organism
fin
Flavobacterium indicum
Pathway
fin03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
fin00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
KQS_07485 (recQ2)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
fin03019
]
KQS_07485 (recQ2)
03400 DNA repair and recombination proteins [BR:
fin03400
]
KQS_07485 (recQ2)
Enzymes [BR:
fin01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
KQS_07485 (recQ2)
Messenger RNA biogenesis [BR:
fin03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Helicases
KQS_07485 (recQ2)
DNA repair and recombination proteins [BR:
fin03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
Supressor
KQS_07485 (recQ2)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
RecQ_Zn_bind
SNF2-rel_dom
HTH_Crp_2
HTH_9
Motif
Other DBs
NCBI-ProteinID:
CCG53455
UniProt:
H8XR07
LinkDB
All DBs
Position
1632571..1634454
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AA seq
627 aa
AA seq
DB search
MNSALEVLKKHWNYDSFRVPQDAIIQSVLEGNDTFALLPTGGGKSICFQIPALLKPGLCL
VISPLVALMKDQVENLKNRDIKALALVGGISFEETSQLLDNCTFGGYKFLYVSPERLQQD
WILERIKQLNINLVAIDEAHCISQWGHDFRPAYLKISNLKEHFHVPFIALTATATEKVQE
DICSLLQFKNTKVFKKSFNRFNLGYHVIYTEDKITKLKQIFTKNPQPSIVYVRNRKACLE
ISKQLNELGFSATYYHGGLKSKEKTQNMQLWMEEKAFIMVATNAFGMGIDKPNVKTVIHL
QVPENIENYYQEAGRAGRNGEKAYALLLTHEFDIKKTREQFITSLPDKSFLNKVYHALNN
YFQIAYGEGTGTIFTFNLQIFCQKYNFPVSKTFSCIQFLDREGILTFNNETNDKAQIQFL
IESREIIRYISLNPKDEPIINAILRTYPGIFEQLTAINTILIANKSNTTEETIIVLLQKL
QQQDIIELHLFSNDSKIIFNEPREDDYTINRISKHLNNQNQLKIEKFEAILAFVNDKKTC
KSVLISNYFGEENETACGICSTCLQQKQDNLKDSTSVITNLLQKSAMTSQELQHSSQLSN
EALIFALQTLLENDIIFLNQNKKYQIK
NT seq
1884 nt
NT seq
+upstream
nt +downstream
nt
atgaatagtgcgttagaagttttaaaaaaacattggaattacgattccttccgtgttcct
caagatgccattattcaaagtgttttagaaggaaatgatacctttgcattgcttccaact
ggtggcggaaaatcaatttgctttcaaattccagccttattaaaacctggactttgtttg
gtaatttctcctttggttgctttaatgaaggatcaggttgaaaatttaaaaaatagagac
attaaagcactcgctttggttggtggtatttcatttgaagaaaccagtcaattactagat
aattgtacatttggaggttataaatttttatatgtttcaccagaacgtttgcaacaagat
tggattttagaacgtatcaaacaattaaacatcaatttagttgctattgatgaagcgcat
tgtattagtcaatggggacatgacttccgtcctgcttatttaaaaatcagcaatttaaaa
gaacattttcatgtaccttttattgctctaactgcaacagctactgaaaaagtacaagaa
gatatttgttcactattacaatttaaaaatacaaaagtttttaaaaaatcgtttaaccga
ttcaatttaggttatcatgttatctatacagaggataaaataactaaattaaaacagatt
tttacaaaaaatcctcagccttccatagtttatgttcgcaacagaaaagcttgtttagaa
attagtaaacaattaaatgaattaggtttttctgcaacgtattatcacggcggactaaaa
agtaaagaaaaaacacaaaatatgcaattatggatggaagaaaaagcattcataatggtt
gccaccaatgcctttggaatgggaattgacaagcccaatgtaaaaactgtaattcatctt
caagtaccagaaaatattgaaaattattatcaagaagctggaagagctggtcgaaatggt
gaaaaagcgtatgctcttttattaactcacgaatttgatatcaaaaaaacaagagaacaa
tttatcacttctttacccgataaatcttttttaaataaagtttatcatgctttaaataat
tattttcaaattgcttatggcgaaggtactggaacaatctttacttttaatctacaaata
ttttgtcaaaagtataatttccctgtttctaaaacttttagctgcattcagtttttagac
cgagaaggtattttaacatttaataatgaaactaacgataaagctcaaattcaattttta
attgaaagccgtgaaataattcgatacattagtttaaatcctaaagacgagccaattata
aatgctatcctaagaacttatcctggtatatttgaacaactaaccgcaataaatacaatt
ttaatagccaataaatcaaatacaactgaagaaactataattgttcttttgcaaaagtta
caacaacaagacattattgaattacacttattttcaaacgacagtaaaattatatttaac
gaacctcgagaagacgattatacaataaatagaattagtaaacatttaaacaatcaaaat
caattaaaaattgaaaaatttgaagcaattcttgcgtttgtaaacgataaaaaaacgtgt
aaatcagttttaatttcgaactattttggtgaagaaaacgagacagcatgcggaatttgt
tctacttgtttacaacaaaaacaagataatctaaaagatagtacttcagtcattacgaat
ttacttcaaaaaagcgcaatgacttcacaagaattacaacatagttcacaactatcaaat
gaagcacttatctttgcacttcaaacactattggaaaatgatataattttcttaaatcaa
aataaaaaataccaaattaagtaa
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