Flavobacterium indicum: KQS_07495
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Entry
KQS_07495 CDS
T01781
Symbol
hupB
Name
(GenBank) Histone-like bacterial DNA-binding protein HU-beta
KO
K03530
DNA-binding protein HU-beta
Organism
fin
Flavobacterium indicum
Brite
KEGG Orthology (KO) [BR:
fin00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
fin03032
]
KQS_07495 (hupB)
03036 Chromosome and associated proteins [BR:
fin03036
]
KQS_07495 (hupB)
03400 DNA repair and recombination proteins [BR:
fin03400
]
KQS_07495 (hupB)
DNA replication proteins [BR:
fin03032
]
Prokaryotic type
DNA Replication Initiation Factors
Initiation factors (bacterial)
KQS_07495 (hupB)
Chromosome and associated proteins [BR:
fin03036
]
Prokaryotic type
Nucleoid associated proteins
HU (heat unstable protein)
KQS_07495 (hupB)
DNA repair and recombination proteins [BR:
fin03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHIIR (short-homology-independent illegitimate recombination)
Supressor
KQS_07495 (hupB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Bac_DNA_binding
HU-HIG
HU-CCDC81_bac_2
HU-DNA_bdg
Motif
Other DBs
NCBI-ProteinID:
CCG53457
UniProt:
H8XR09
LinkDB
All DBs
Position
1635564..1635842
Genome browser
AA seq
92 aa
AA seq
DB search
MNKSELIDAMAASAGITKAAAKLALESFLESVEGTLQKGGRVSLVGFGSWSVSKRAAREG
RNPQTGKTIKIAAKNVVKFKAGAELEGSVNKK
NT seq
279 nt
NT seq
+upstream
nt +downstream
nt
atgaacaaatcagaattaatcgatgcaatggcagcttctgctggaattactaaagctgct
gctaaattagctttagaatcatttttagaaagcgttgaaggaacgttacaaaaaggtgga
agagtttcattagtaggatttggttcttggtcagtttctaaaagagctgcaagagaaggt
agaaatcctcaaactggtaaaactatcaaaatcgctgctaaaaacgtagttaaattcaaa
gcaggtgctgaattagaaggatcagtaaacaaaaaataa
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