Flavobacterium indicum: KQS_08895
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Entry
KQS_08895 CDS
T01781
Symbol
trmE
Name
(GenBank) tRNA modification GTPase TrmE
KO
K03650
tRNA modification GTPase [EC:3.6.-.-]
Organism
fin
Flavobacterium indicum
Brite
KEGG Orthology (KO) [BR:
fin00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
fin03016
]
KQS_08895 (trmE)
Transfer RNA biogenesis [BR:
fin03016
]
Eukaryotic type
tRNA modification factors
Other tRNA modification factors
KQS_08895 (trmE)
Prokaryotic type
Methyltransferases
KQS_08895 (trmE)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
MnmE_helical
TrmE_N
MMR_HSR1
FeoB_N
RsgA_GTPase
GTP_EFTU
Ras
Arf
MMR_HSR1_Xtn
Dynamin_N
Roc
cobW
DO-GTPase2
Gtr1_RagA
PduV-EutP
ABC_tran
AAA_22
ATP_bind_1
Septin
ABC_ATPase
AAA
Guanylate_kin
DUF2067
AAA_29
AAA_24
AAA_16
NOG1
Motif
Other DBs
NCBI-ProteinID:
CCG53714
UniProt:
H8XTY4
LinkDB
All DBs
Position
1894836..1896245
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AA seq
469 aa
AA seq
DB search
MIPQDTIVALATPSGAGAIAVIRLSGKEAISIAAEVFQSVSGKDISKQRTHTIHLGHIVS
EGKIYDQVLLSIFKGPNSYTGEHVVEISCHGSTFIQQQIIQLLLRKGAKMAQAGEFTLRA
FLNGKLDLSQAEAVADLIASDNEASHQIAMQQMRGGFSNEIAKLREELLNFASLIELELD
FAEEDVEFADRSAFHELLNRIEFVLKRLIDSFAVGNVIKNGIPVAIVGEPNVGKSTLLNA
LLNEERAIVSDIAGTTRDTIEDELVINGIGFRFIDTAGIRETKDVVESIGIQKTFEKMEQ
AQVVLFLVDSSQFTADSIENLKIEIEKVKNKYPTKAIVAIINKVDLLSEEDVKSIQEQLS
TFDVQLSTIFISAKQKIGIDELKNTLLSFVNTGALRNNETIVTNTRHYDSLLKALEEIQK
VKWGLESHLSSDLIAIDIRSALHFFGEITGEVTNDELLGNIFANFCIGK
NT seq
1410 nt
NT seq
+upstream
nt +downstream
nt
atgattccacaagatactattgttgcgttagcgacgccttcgggtgcaggtgccattgcg
gttattcgtttgtctggaaaagaggcaatttctattgctgcggaagtttttcaatcggtt
tcaggtaaagacataagcaagcaacgtacgcatactattcatttggggcatattgtttcg
gaaggtaaaatttatgaccaagtgttgctttcaatttttaaaggaccgaattcttatacg
ggtgaacatgtggtggaaatttcttgccacggttctacttttattcagcaacaaattatt
caacttttacttcgtaaaggtgcgaaaatggctcaggcgggtgaatttacgttacgtgct
ttcttaaacggtaaactcgatttatctcaggcggaagcggtagccgatttaattgcttcc
gacaatgaggcgagtcaccaaattgccatgcaacaaatgcgcggtgggttcagtaatgaa
attgccaaattgcgtgaggaattgttgaattttgcttcgttgattgaactggaattagac
tttgcagaagaagatgtggagtttgcggatcgttcggcgtttcatgaattgctaaaccgc
attgagtttgtgttaaaacgtttaattgacagttttgcggtggggaacgtgattaaaaac
gggattccggttgcgattgtaggcgaaccaaatgtggggaaatcgaccttattgaatgcc
ttattgaacgaagaacgtgcgattgtttcggacattgcgggtacgacacgagacactatt
gaagacgaattggtgattaacggtattggcttccgttttattgatacggccgggattcgt
gaaacgaaggatgtggtggaaagtattggaatccagaagacgtttgaaaaaatggaacag
gcgcaggtggtgctgtttttagttgatagttcacagttcactgctgacagtatagaaaat
ctgaaaattgaaattgaaaaggtaaaaaacaaatatcctactaaagccatcgtcgctatt
atcaataaagtagatttattgtctgaggaagatgtgaaaagtattcaagaacaactttcg
acttttgacgtgcaactttcgactatttttatttctgcgaaacaaaaaattggtattgac
gaacttaaaaacacgttactttcttttgtcaacacgggtgcgttacgaaacaacgagacg
attgttaccaatacgcgtcattatgattcgttattaaaggctttggaagaaattcagaag
gtaaaatggggcttggaatcgcacttatcgtctgatttaattgcgattgacatccgctcg
gccctacacttctttggggaaattacaggtgaagtcacgaatgatgagttgcttgggaat
attttcgcgaatttctgtatcgggaaataa
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