Flavobacterium indicum: KQS_09920
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Entry
KQS_09920 CDS
T01781
Symbol
holA
Name
(GenBank) Probable DNA polymerase III, delta subunit
KO
K02340
DNA polymerase III subunit delta [EC:
2.7.7.7
]
Organism
fin
Flavobacterium indicum
Pathway
fin03030
DNA replication
fin03430
Mismatch repair
fin03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
fin00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
KQS_09920 (holA)
03430 Mismatch repair
KQS_09920 (holA)
03440 Homologous recombination
KQS_09920 (holA)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
fin03032
]
KQS_09920 (holA)
03400 DNA repair and recombination proteins [BR:
fin03400
]
KQS_09920 (holA)
Enzymes [BR:
fin01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
KQS_09920 (holA)
DNA replication proteins [BR:
fin03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
KQS_09920 (holA)
DNA repair and recombination proteins [BR:
fin03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
KQS_09920 (holA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol3_delta
DNA_pol3_delta_C
DNA_pol3_delta2
DUF3337
DUF3653
Motif
Other DBs
NCBI-ProteinID:
CCG53913
UniProt:
H8XUY5
LinkDB
All DBs
Position
complement(2120107..2121111)
Genome browser
AA seq
334 aa
AA seq
DB search
MTDLIKITNDIKSKNFKPIYFLCGEETYYIDRIAEFIEEHVLTEDEKAFNQVVLYGRDTS
VEEIVSTAKRFPMMADYQVVIVKEAQNLNRTIDALQAYAENPQPTTILVLAYRDKPDGRK
KVFKVIKDKHVYFESKKLYDNQIPDWISKVLKGKNYAIQPKAALMLSEFLGTDLAKISNE
LDKLRIIFPEGHTFTPKDIEVNIGFSKDYNVFELKSALALRDQEKAYSIIHHFAQNPKDN
PIVVITGQLFSFFSQLLQFHGLKDKSNKREVASKIGVNPYFVDEYFTAARNYPMRKVSQI
VQVLRDVDVKSKGVGAGSMKEDDLLKELVYKIFN
NT seq
1005 nt
NT seq
+upstream
nt +downstream
nt
atgactgatttaattaaaattaccaacgatataaaaagcaaaaatttcaagcccatttat
tttttatgtggtgaagaaacctattacatcgatagaattgctgaatttattgaagaacat
gtgctgacagaagatgaaaaagcttttaatcaggtggtgttgtatggaagagatacttca
gtagaagaaattgtttctactgcaaaacgatttcctatgatggctgattatcaggtggta
attgtgaaggaagcgcagaatttaaatcgaactattgatgcacttcaagcgtatgctgaa
aatcctcaacctactacaattctagtattagcctacagagacaaacccgatggtcgtaaa
aaagttttcaaagtaatcaaagacaagcatgtctattttgaaagtaaaaaattatacgac
aatcaaattcccgattggatttcgaaggtattaaaagggaaaaattatgcaattcaacct
aaagcagccttaatgctgtcagaatttttaggaaccgatttggccaaaatttcgaatgaa
ttagacaaactccgaattattttcccagaaggtcatacctttactcctaaggacatagag
gtaaatattggcttcagtaaagattataatgtgtttgaattaaaatcggccttagcacta
cgagatcaggaaaaagcttattctataattcatcattttgctcaaaatcctaaagacaat
ccaattgtagtgataacgggacaattgtttagttttttttctcaattattgcaatttcat
gggttaaaagacaagtctaataaacgtgaagtagccagtaaaataggcgtaaatccgtat
tttgtagatgaatattttaccgcagcacgaaactatcccatgcgaaaagtgagtcagatt
gttcaagtgttgcgcgatgttgatgtaaaaagtaaaggtgtaggcgcaggatctatgaaa
gaagatgatttgttaaaagaattggtttataaaatatttaattag
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