Flavobacterium indicum: KQS_12260
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Entry
KQS_12260 CDS
T01781
Symbol
ruvC
Name
(GenBank) Crossover junction endoribonuclease
KO
K01159
crossover junction endodeoxyribonuclease RuvC [EC:
3.1.21.10
]
Organism
fin
Flavobacterium indicum
Pathway
fin03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
fin00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
KQS_12260 (ruvC)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
fin03400
]
KQS_12260 (ruvC)
Enzymes [BR:
fin01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.21 Endodeoxyribonucleases producing 5'-phosphomonoesters
3.1.21.10 crossover junction endodeoxyribonuclease
KQS_12260 (ruvC)
DNA repair and recombination proteins [BR:
fin03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
KQS_12260 (ruvC)
RecFOR pathway proteins
KQS_12260 (ruvC)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RuvC
HB_ELP1
Motif
Other DBs
NCBI-ProteinID:
CCG54359
UniProt:
H8XRC5
LinkDB
All DBs
Position
complement(2609527..2610081)
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AA seq
184 aa
AA seq
DB search
MSNERIILGIDPGTTIMGFGLIKVVNKKMEFMQLNELLLNKYDDHYLKLQKIFERTIELI
DTYHPDEIAIEAPFFGKNVQSMLKLGRAQGVAMAAGLSRQIPITEYEPKKIKMAITGNGN
ASKEQVAKMLQQLVGLKELPKNLDSTDGLAAAVCHFFNTGRPELGKKYTGWDAFVKQNEN
RIKK
NT seq
555 nt
NT seq
+upstream
nt +downstream
nt
ttgtcaaacgagagaatcatattaggaattgacccaggaacaaccattatgggatttgga
ttgataaaagtggtcaataagaaaatggagtttatgcaattgaatgaattgttgttgaat
aaatacgacgatcattatttaaaattgcagaaaatttttgaacggaccattgaattaatc
gacacctaccatccagatgaaattgcgattgaagctcctttttttgggaaaaatgtacaa
tccatgctcaagttaggtcgcgcccaaggtgtggctatggctgctgggttatcgcgccaa
attccaattacagaatatgagcctaaaaaaataaaaatggcaattacaggaaatgggaat
gcaagtaaagagcaggtagctaaaatgctccaacaattagtgggcttaaaggaattgcca
aaaaatctggattcaaccgatggcttagctgccgcggtttgtcattttttcaatacaggc
cgaccagaattaggtaaaaaatataccggttgggatgcctttgtgaaacaaaacgaaaat
cgaataaaaaaataa
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