Flavobacterium indicum: KQS_12685
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Entry
KQS_12685 CDS
T01781
Symbol
xth
Name
(GenBank) Exodeoxyribonuclease III
KO
K01142
exodeoxyribonuclease III [EC:
3.1.11.2
]
Organism
fin
Flavobacterium indicum
Pathway
fin03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
fin00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
KQS_12685 (xth)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
fin03400
]
KQS_12685 (xth)
Enzymes [BR:
fin01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.11 Exodeoxyribonucleases producing 5'-phosphomonoesters
3.1.11.2 exodeoxyribonuclease III
KQS_12685 (xth)
DNA repair and recombination proteins [BR:
fin03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
AP endonucleases
KQS_12685 (xth)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Exo_endo_phos
Exo_endo_phos_2
Motif
Other DBs
NCBI-ProteinID:
CCG54441
UniProt:
H8XRK7
LinkDB
All DBs
Position
complement(2702376..2703140)
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AA seq
254 aa
AA seq
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MKIISYNVNGIRAAITKGFLEWLQQANPDVICLQEIKATEDQIPKLEIEAAGYPYQYYFS
AEKKGYSGVAILSKYEPKNVVFGTGIDYMDKEGRNLRVDFDDLSVMSLYLPSGTNSDRLD
HKFQYMDDFHNYIEALRKEISHLVVCGDYNICHQAIDIHDPIRNAKVSGFLPEERAWLDK
FISSGMVDTFRHLNKEPHNYSWWSYRANARNNNKGWRIDYCLASEPMKDKIKRALILPEA
KHSDHCPVYVEFDL
NT seq
765 nt
NT seq
+upstream
nt +downstream
nt
atgaagattatttcttataatgtaaatggaattagagcggcaattactaaaggattttta
gaatggttacaacaagcaaatccggatgtaatttgtttgcaagaaattaaagcaacagaa
gatcaaatcccaaagttggaaattgaagcagcaggttatccataccaatattatttttct
gccgaaaaaaaaggatatagtggtgtagcaattttgtcaaaatatgaacctaagaatgtt
gtttttggaacaggaattgattacatggataaagaaggtaggaatttgcgtgtagacttt
gatgatctatcagtcatgagtttgtatttgccttcggggacaaatagtgatagactggat
cataaatttcaatatatggatgattttcataactatattgaagcgttaagaaaagaaatt
tcgcatttagtagtttgtggagattataatatttgtcatcaagccatagatattcatgac
cctattagaaatgctaaagtttcaggttttttaccagaagaacgggcatggttagataaa
tttatttcaagtggaatggtggatacctttcgtcatttaaataaagagccgcacaattat
agttggtggagttaccgcgctaatgcaagaaataataataaaggatggcgaattgattat
tgtttggcctccgaacctatgaaagataaaataaaaagagccttaatattgcctgaagcc
aaacattcagaccattgtccggtatatgttgaatttgatttataa
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