Flavobacterium indicum: KQS_13595
Help
Entry
KQS_13595 CDS
T01781
Symbol
uvrC
Name
(GenBank) Excinuclease ABC, C subunit
KO
K03703
excinuclease ABC subunit C
Organism
fin
Flavobacterium indicum
Pathway
fin03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
fin00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
KQS_13595 (uvrC)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
fin03400
]
KQS_13595 (uvrC)
DNA repair and recombination proteins [BR:
fin03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
KQS_13595 (uvrC)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrC_RNaseH_dom
GIY-YIG
HHH_5
HHH_2
GIY_YIG_2
5_3_exonuc
Pox_polyA_pol_N
Transposase_20
DUF1825
UVR
Motif
Other DBs
NCBI-ProteinID:
CCG54616
UniProt:
H8XS32
LinkDB
All DBs
Position
2910084..2911874
Genome browser
AA seq
596 aa
AA seq
DB search
MPTPLELQIQTLPDSPGVYQYFDKEGKILYVGKAKNLKKRVQSYFSKNHDNYKTSVLVKK
IVSIKHIVVPTETDALLLENNLIKKLQPRYNVLLKDDKTYPWICIKREPFSRVFPTRKMV
KDGSEYFGPYTSFKTVNTLLELIKELYPLRTCNYDLSHGNIVSGKYKVCLEYHIGNCKGP
CEGYETLENYQNQIQAIREILKGNFKESLKDFKKLMTDLAIDMRFEEAQKIKEKIEVLEN
YQAKSTILNPKITNVDVFSIVSDESMAFVNFLQISHGAIIRSHTLELKKKLDETDEELLE
LAIIEIRERFHLTSKEIIVPFEIDLGENIKITVPKLGDKKEILNLSERNAKHYRLDQLKQ
IKIVDPDRHTNRIMAQMMKDLRLSVEPRHIECFDNSNIQGTNPVSACVVFKDGKPSKKDY
RHFNIKTVEGPNDFASMEEVVYRRYKRLLDENEPLPQLIIIDGGKGQLSSALKSLEELGL
RGKIAIIGIAKRLEELFYPDDPIPLYLDKKSETLKTIQHLRNEAHRFGITHHRDKRSKSA
LQTSMETIPGIGEKTMVTLIKHFKSVKRIKEADENEIAKVIGLSKAKKISDFYKKE
NT seq
1791 nt
NT seq
+upstream
nt +downstream
nt
atgcctactcctttagaacttcaaattcaaaccttacccgatagccctggtgtatatcaa
tattttgataaagaggggaaaattttatacgtaggcaaagccaaaaatttaaaaaaaaga
gtgcagtcttatttttctaaaaaccatgataattacaaaacatcggttttagtaaaaaaa
atagttagtatcaaacacattgttgttccaaccgaaacagatgccttattattagaaaac
aatttaattaaaaaactccaaccaagatataatgtattattaaaagacgacaaaacctac
ccttggatttgtataaaaagagaacctttttctagagtattccctacccgaaaaatggta
aaagacggttctgaatatttcggtccttacaccagttttaaaacggtgaataccttatta
gaattaatcaaagaattatatccattaagaacttgcaactatgatttatctcatggaaat
attgtctctggaaaatacaaagtgtgtttagaataccacattggtaattgtaaaggtccg
tgtgaaggctacgaaaccttagaaaattaccaaaaccaaatccaggccattcgagaaatt
ttaaaaggaaatttcaaagaaagtttaaaagattttaaaaaattaatgaccgatttggct
attgatatgcgctttgaagaggcacaaaaaataaaagaaaaaattgaggtgctagaaaat
tatcaagccaaatcaaccattttaaatccaaaaataacgaacgtcgatgttttttcaatt
gtgtcagatgaaagtatggcttttgttaattttttacagatttcacatggtgctattatt
cgttcgcacactttagaattaaaaaagaaattagatgaaacggatgaagagttattagaa
ttagcaatcatcgaaattcgggaacgttttcatttaacttctaaagaaatcatagtgcct
ttcgaaattgatttaggcgaaaacataaaaattaccgttccaaaattaggagataaaaaa
gaaattctgaatttatcggaacgcaatgcaaaacattatcgattggaccaattaaaacag
atcaaaattgtggatccggaccgacataccaatcgcataatggctcaaatgatgaaagac
ttgcgtttatctgtagagcccagacatattgagtgttttgataattcgaatattcaagga
accaatccggtttctgcatgcgttgtatttaaagatggtaaaccaagtaaaaaagactac
cgccattttaatatcaaaaccgtggaaggtccaaacgattttgcatccatggaggaagtc
gtataccgaagatataagcgtttgttagacgaaaacgaaccgttgccacaattaattatt
attgatggtggaaaaggtcaattgtcctcggctttaaaaagtttagaggaattaggatta
agaggaaaaattgccattattggcatcgctaaacgattagaagaattgttttatcctgat
gatcctattccgttgtacctagataaaaaatcagaaacgttaaaaacaatccaacacctt
cgtaatgaagcccaccgttttggaattacacatcatagagataaaagaagtaaatcggcc
ttacaaacgagtatggaaaccattccagggataggagaaaaaaccatggtgacgttaata
aaacacttcaaaagtgtaaaaagaataaaagaagcggatgaaaatgaaattgcgaaagta
attgggctttcaaaagcgaaaaaaatttccgacttttacaaaaaagaataa
DBGET
integrated database retrieval system
