Fischerella sp. NIES-3754: FIS3754_04540
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Entry
FIS3754_04540 CDS
T04195
Name
(GenBank) group 2 sigma 70-type sigma factor
KO
K03087
RNA polymerase nonessential primary-like sigma factor
Organism
fis
Fischerella sp. NIES-3754
Brite
KEGG Orthology (KO) [BR:
fis00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
fis03021
]
FIS3754_04540
Transcription machinery [BR:
fis03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Sigma factors
FIS3754_04540
BRITE hierarchy
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Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma70_r3
Sigma70_r2
Sigma70_r4
Sigma70_r1_2
Sigma70_r4_2
HTH_Tnp_ISL3
HTH_28
HTH_25
HTH_24
HTH_23
HTH_17
Put_DNA-bind_N
Motif
Other DBs
NCBI-ProteinID:
BAU04566
UniProt:
A0A0S3THJ8
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All DBs
Position
complement(488681..489667)
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AA seq
328 aa
AA seq
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MMPICNITTTSNIKFSTDIVRNYLQDIVRVPLLTHEEEIVYSKQVQQMITLQNKKETLQK
QLNHEPSQKELAQYVQLSEMEVKEIFQKGTQSKQKMMVANLRLVVSIAKKYQGRNVEFMD
LIQEGSLGLERGVEKFDPTRGYKFSTYAYWWISQGMTRAISQQSRTIRLPIHLTEKLNKF
KKVQRELSQKLKRSPSVPEIAEKMKLNPAQIRELLMISRQPVSLDKQVGDNEDTELQELL
TEVPEASPEIQVTQNLMRQDIYLSLRELTPQQQQVLILHYGLEDNCELTLTQVAQHLNIS
ERRVRYIEKQALSYLRRCHTNLQHYIFS
NT seq
987 nt
NT seq
+upstream
nt +downstream
nt
atgatgccgatttgtaacatcacaacaacgtcaaatattaaattcagcacagatatagtt
cgtaattatctgcaagatattgttcgtgtaccattgttgactcatgaggaagaaattgta
tatagcaaacaggtacagcagatgattacgttacaaaataaaaaggaaactttgcagaaa
caactcaatcacgaaccatctcaaaaagaattagctcaatatgtacaacttagtgaaatg
gaagtgaaggaaatttttcagaaaggtacacaatcaaagcaaaaaatgatggtagcaaat
ctccgtttagtggtttctatcgccaaaaaatatcaaggacgaaatgtggagtttatggat
ttaattcaggaaggttcattaggtttagagcgtggtgtagagaaatttgaccccactcgt
ggctataagttttctacctatgcttattggtggattagccagggaatgacacgagcaata
tctcagcaatcacgaactattagactgccaattcatcttaccgaaaagttgaataaattt
aaaaaagtgcaaagagaattatctcaaaaattaaagcgtagtcctagtgtacctgaaatt
gcagaaaagatgaaattaaaccctgctcaaatccgcgaactgctgatgatatctcgtcaa
cctgtctcattagataaacaagtgggcgataacgaagacacagaattgcaagaactttta
acagaagttccagaagcctcgcctgaaatccaagtaactcaaaatttaatgcgtcaagat
atctatctctcgctgagagaattaactccacagcagcaacaagtcctaattttgcattat
ggcttggaagataattgtgaactcactttgacgcaggtagctcaacatctcaacattagt
gagaggagagttcgttatatagaaaaacaagcactgagttatctccgtcgttgccacaca
aatctacaacactatattttcagttaa
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