Fischerella sp. NIES-3754: FIS3754_11790
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Entry
FIS3754_11790 CDS
T04195
Name
(GenBank) RNA polymerase sigma factor SigC
KO
K03087
RNA polymerase nonessential primary-like sigma factor
Organism
fis
Fischerella sp. NIES-3754
Brite
KEGG Orthology (KO) [BR:
fis00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
fis03021
]
FIS3754_11790
Transcription machinery [BR:
fis03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Sigma factors
FIS3754_11790
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Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma70_r3
Sigma70_r2
Sigma70_r4
Sigma70_r1_2
Sigma70_r4_2
GerE
HTH_28
Spectrin
Motif
Other DBs
NCBI-ProteinID:
BAU05284
UniProt:
A0A0S3TJN0
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Position
1298457..1299707
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AA seq
416 aa
AA seq
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MPATSFYAEAAYETQQSSQMFDPDLTIDDTELPVDDLEELEMAAQDPASFAVSANRRSTD
LVRLYLQEIGRVRLLGRDEEVSEAQKVQRYLRMRIVLSNAAKQGDEILIPYLRVIEVQER
LASELGHRPSIERWASAAGVEVLELKQILGQGKRRWAEIAKLTVEELEKIQSDGLQSKEH
MIKANLRLVVSVAKKYQNRGLELLDLVQEGTLGLERAVEKFDPTKGYRFSTYAYWWIRQG
ITRAIATSSRTIRLPVHITEKLNKIKKAQRKIAQEKGRTPTLEDLAQELEMTPTQVREVL
LRVPRSVSLETKVGKDKDTELGELLETDSVTPEDMLMRESLQRDLQHLLADLTNRERDVI
LMRFGLADGQPYSLAEIGRALDLSRERVRQIESKALQKLRQPKRRNLIRDYLESLS
NT seq
1251 nt
NT seq
+upstream
nt +downstream
nt
atgccagcaacatctttttacgcagaagccgcctacgaaacccaacaatcctctcaaatg
tttgacccggatcttacgattgatgacactgaattaccagtagacgatctggaagagttg
gagatggctgctcaagatcccgccagttttgctgttagcgctaaccgtcgcagcacagat
ctggtgcgtctgtatcttcaggaaattggtagggttagactgttagggcgggatgaagag
gtttcagaagctcagaaagttcagcgctacttgcggatgcggatagtcttgtctaatgct
gccaagcaaggagacgaaatactaataccttatctccgagtcatcgaagttcaggagcgt
ttagcatcggaattgggacatcgcccttctatcgaaaggtgggcgagcgctgctggtgta
gaggtgttggaactcaaacaaattttaggacaagggaaacggcgctgggctgaaattgcc
aaattgactgtggaggaattggagaaaattcagagtgatggactccagtccaaagaacac
atgatcaaggcgaacctccgcctagttgtatctgttgctaaaaagtaccaaaatcgtggt
ctagaattgttagatttagtccaagaaggaactttgggcttagagcgagctgtggaaaaa
tttgacccaaccaagggttatcgttttagcacttacgcctattggtggattcgtcagggg
atcacacgggcgatcgcaacttctagccggacaattcgccttcctgttcacattacagaa
aagctgaacaaaatcaaaaaagctcaacgtaaaattgctcaagaaaaaggtcgtacccca
actctggaagacttggcgcaagagttagaaatgacacctacccaagttagagaagtgttg
ttaagggtgcctcgctccgtctctctagaaaccaaggttggtaaagataaagacacagaa
ttaggcgaattgctggaaaccgacagtgtgacgccagaggatatgctcatgcgagaatca
ttacaaagagacttgcagcacctgttggcagatttaaccaaccgtgaacgggacgtgatt
ctcatgcggtttggactagcagacggtcagccttactcgctagcagaaattgggcgcgct
cttgacttatcacgagaacgagtacgccaaattgaatccaaagcactgcaaaagttacgc
caacccaagcgacgcaacctgattcgcgattatttggagtctctgagctaa
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