Fischerella sp. NIES-3754: FIS3754_16420
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Entry
FIS3754_16420 CDS
T04195
Name
(GenBank) 60kD chaperonin 1
KO
K04077
chaperonin GroEL [EC:
5.6.1.7
]
Organism
fis
Fischerella sp. NIES-3754
Pathway
fis03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
fis00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
FIS3754_16420
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
fis03019
]
FIS3754_16420
03110 Chaperones and folding catalysts [BR:
fis03110
]
FIS3754_16420
03029 Mitochondrial biogenesis [BR:
fis03029
]
FIS3754_16420
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
fis04147
]
FIS3754_16420
Enzymes [BR:
fis01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.1 Enzymes altering polypeptide conformation or assembly
5.6.1.7 chaperonin ATPase
FIS3754_16420
Messenger RNA biogenesis [BR:
fis03019
]
Prokaryotic type
Bacterial mRNA degradation factors
Other RNA degradation factors
Chaperones
FIS3754_16420
Chaperones and folding catalysts [BR:
fis03110
]
Heat shock proteins
HSP60 / Chaperonin
FIS3754_16420
Mitochondrial biogenesis [BR:
fis03029
]
Mitochondrial protein import machinery
Matrix
Other matrix factors
FIS3754_16420
Exosome [BR:
fis04147
]
Exosomal proteins
Exosomal proteins of haemopoietic cells (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
FIS3754_16420
Exosomal proteins of other body fluids (saliva and urine)
FIS3754_16420
Exosomal proteins of breast cancer cells
FIS3754_16420
Exosomal proteins of colorectal cancer cells
FIS3754_16420
Exosomal proteins of bladder cancer cells
FIS3754_16420
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Cpn60_TCP1
MT0933_antitox
EAD9
Motif
Other DBs
NCBI-ProteinID:
BAU05735
UniProt:
A0A0S3TKZ3
LinkDB
All DBs
Position
1824752..1826386
Genome browser
AA seq
544 aa
AA seq
DB search
MAKTILYNDVARRSLEKGIDALAEAVAVTLGPKGRNVVLEKKYGAPQIINDGVTIAKEIE
LEDHVENTGVSLLRQAASKTNDIAGDGTTTATVLAHAMVKEGLRNVAAGANPLLLKRGID
KATHFIVDRIQEHARQIDDSKSIAQVATISAGNDAEVGQMIAEAMEKVGKEGIISLEEGK
SMQTELEVTEGMRFDKGYISPYFVTDAERMEAILEEPYILITDRKITLVQDLVPILEQMA
RASKPLLIIAEDIEKEALATLVVNNMRGVLRVCAVKAPGFGDRRKAMLEDIAVLTNGQVI
SEDTGLKLENAKLEMLGKARRVTITKEDTTIVAEGNEKAVKARCEQIRRQIEETDSSYDK
EKLQERLAKLAGGVAVIKVGAATETELKDRKLRLEDAINSTKAAVEEGIVPGGGTTFAHL
APQLEEWAKSNLQDEQLTGAMIVARALYAPLRRIADNAGVNGAVIAEHVRGLPFDEGYDA
AKDTFANMFEAGIVDPAKVARSALQNAASVAGMVLTTECIVVDKPEPKEKTPAGAGAGGG
DFDY
NT seq
1635 nt
NT seq
+upstream
nt +downstream
nt
atggccaaaaccattttgtacaatgatgttgctcgccgcagtcttgaaaaagggattgac
gcactggcagaagcggtggctgtcacccttggtcctaaggggcgcaatgtcgtgctggag
aagaaatacggcgcaccgcaaattatcaatgatggcgtgaccattgccaaagaaattgag
ctagaagatcacgtagaaaacaccggagtgtctctcctgcgtcaagcggcatcgaaaacg
aacgatatagcaggagatggaacgaccaccgcaaccgtacttgcccatgccatggttaaa
gaagggttgcgcaacgtggcggctggagcgaatccattgctgttgaaacgaggtattgat
aaagccacccactttattgttgaccggattcaggaacatgcccgtcagatcgatgactcc
aaatcgattgctcaggtggcaaccatttctgcgggcaatgatgctgaagttgggcaaatg
attgccgaagcgatggaaaaagtcggcaaagaaggcataatttccctagaagaagggaag
tctatgcagacggaattggaagtcacggaagggatgcgctttgacaaaggctacatttcc
ccctatttcgtgaccgatgccgaacgcatggaagcgattctggaagaaccctatatcctg
attaccgacagaaagattaccctggtgcaggatctagtcccaattctggaacagatggca
cgggcatccaaaccgctcctgatcattgctgaagacattgaaaaagaagctttggcaacc
ctggttgtgaataatatgcgtggcgtactacgggtctgcgccgtcaaagcaccaggattt
ggcgatcgccgtaaagccatgctggaagacatcgccgtcctcaccaacggtcaggtaatc
agcgaagacacaggcttgaagttggaaaatgccaagctcgaaatgcttggtaaagcccgt
cgtgtcaccatcaccaaagaagacaccacgatcgtggctgaaggcaacgaaaaagccgtc
aaagcccgttgtgaacaaattcgtcgccaaattgaggaaaccgactcgtcctacgacaaa
gaaaaactgcaagaacgactggcgaagctcgcaggtggcgtagcagtcatcaaagtggga
gctgcaacggaaactgaattaaaagaccgtaagctccggctggaagacgccatcaactcg
actaaagccgccgtggaagaagggattgtgcccggtggtggcaccacctttgctcacctc
gcgccgcaactggaagaatgggcgaagagcaatcttcaagatgaacaattgaccggtgcc
atgattgtggcacgtgccctctatgcacccctgcgtcggattgcggataacgccggtgtg
aatggtgcagtgattgctgaacatgtgcgagggctgccctttgacgaaggctatgatgcc
gccaaagatacgtttgcgaacatgtttgaagctggcatagttgacccagcaaaagtagct
cgtagcgctctgcaaaacgctgcatcggtagcaggtatggtgctgacaaccgagtgtatt
gttgttgataaaccagaaccaaaggagaaaacccccgcaggcgccggagcaggcggcggt
gactttgactactaa
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