Fischerella sp. NIES-3754: FIS3754_19240
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Entry
FIS3754_19240 CDS
T04195
Name
(GenBank) tRNA pseudouridine synthase B
KO
K03177
tRNA pseudouridine55 synthase [EC:
5.4.99.25
]
Organism
fis
Fischerella sp. NIES-3754
Brite
KEGG Orthology (KO) [BR:
fis00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
fis03016
]
FIS3754_19240
Enzymes [BR:
fis01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.25 tRNA pseudouridine55 synthase
FIS3754_19240
Transfer RNA biogenesis [BR:
fis03016
]
Eukaryotic type
tRNA modification factors
Psudouridine synthases
FIS3754_19240
Prokaryotic type
FIS3754_19240
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TruB_N
TruB-C_2
TruB_C_2
Motif
Other DBs
NCBI-ProteinID:
BAU06013
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Position
2175285..2176154
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AA seq
289 aa
AA seq
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MFGFLNLNKPFGWTSHDCVAKTRKLLRLKRVGHAGTLDPAATGVLPIALGKATRLLQYLP
GEKAYQATIRLGVRTTTDDLQGEIITENSVTNLTLESVKTALQKFQGKIEQIPPSYSAIQ
VDGKRLYELARKGETVEVPVRTVEVFKIEILDWREGEFPEVDVAIACGTGTYIRAIARDL
GTLLETGGTLAALQRTASSGFQLADSLTFTDLEAQLQAGTFQPLPPDVALQHLACVSLNA
PADQKWCQGQKISFEHNSSQILRVYSEDGRFLGIGQTKDGVLIPLLVLV
NT seq
870 nt
NT seq
+upstream
nt +downstream
nt
gtgtttggttttctcaatctcaacaaaccgtttggttggacttctcacgactgtgtagcg
aagacgcgaaaacttttgcgcctcaagcgagtcggacatgctggtactctcgacccagca
gcaacaggtgtgttaccaattgcacttggtaaagctacgcgtttgttacagtatcttcct
ggtgaaaaagcttatcaagcaacaattaggcttggtgtacgtaccactactgatgatttg
caaggagaaataattacagaaaattcagttacaaatttaactttagaatctgtaaaaact
gcattgcaaaaatttcaaggcaaaatagaacaaattccaccgagttacagcgctatacaa
gtagacggaaagcgtttatacgagttagcacgtaagggtgagacggtggaagtgccagtg
cgaacagtggaagtattcaagatagagattttagattggcgagagggggaatttccggag
gtggatgtggcgatcgcctgtggtacgggaacatatattagagcgatcgctcgtgattta
ggtacattattagaaactggcggtactcttgcggctttgcaacgcaccgctagcagtggg
tttcaattagcggatagcctgacttttacagatttagaagcacaattgcaagctggaact
tttcaaccccttccccccgatgtagctttgcagcatttagcttgtgtcagtttaaacgca
ccagcagatcaaaaatggtgtcaaggtcagaagatcagttttgaacataattcttcacaa
atattgcgagtttactcagaagatggacgctttttagggattggacaaacaaaagatggt
gttttgattcctctgcttgttttggtttga
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