Fischerella sp. NIES-3754: FIS3754_19760
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Entry
FIS3754_19760 CDS
T04195
Name
(GenBank) primosomal protein N'
KO
K04066
primosomal protein N' (replication factor Y) (superfamily II helicase) [EC:
5.6.2.4
]
Organism
fis
Fischerella sp. NIES-3754
Pathway
fis03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
fis00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
FIS3754_19760
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
fis03400
]
FIS3754_19760
Enzymes [BR:
fis01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
FIS3754_19760
DNA repair and recombination proteins [BR:
fis03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
FIS3754_19760
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
PriA_3primeBD
DEAD
PriA_C
ResIII
Helicase_C
Zn_ribbon_PriA
Zn_ribbon_6
Nudix_hydro
zf-CHY
Motif
Other DBs
NCBI-ProteinID:
BAU06065
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All DBs
Position
2233227..2235818
Genome browser
AA seq
863 aa
AA seq
DB search
MYINDVSLPPLVVAQSGESYDTRINKNQWVEVLVDCPGIAKEDTTEQKEEEEEEEKLYTY
RLPAGLEVKPGDILSVPFGRQQVGGIAIRLLAQPPAKLAPEKIRDVEDVIHSKFFQESYW
QLLEKVSHYYYTPLIQVIRTALPPGLLGRSQSRLRLKRENIPNGANEFLSLPAREIIKIL
QSQADGDYSFKFLRRQIKGFDRAKKQLIQRGWVETYIELPRYSRPQTKPIVTLTVSVPPI
DLSKRQREILEVLRRHGGELWLNDFLQICNTTTATLKKLEEQGCIVIQQREVLRSENGPT
VAADQPKSLNAAQFQALSTIKEVKGYATLLLHGVTGSGKTEIYLQAIAPLLAQGKSALVL
VPEIGLTPQLTDRFRARFGNKINVYHSALSGGERYDTWRQMLTGEPQIVIGTRSAVFAPL
PNLGLIILDEEHDNSFKQDSPIPTYHARTVAQWRAELENCPLVLGSATPSLESWVRVRDW
GSGQGGQEGVNSPHTFPTPHTPSHYLCLPERIHSRPLPTVEIVDMRQELQQGNRSIFSRS
LQNALQQLKQQNQQGILFIHRRGHSTFVSCRNCGYVLECPHCDVSLAYHQTEAEGPQILR
CHYCNYARSHPRNCPECSSPYLKFFGSGTQRVAQELTKQFPDLRFIRFDSDTTRTKGSHR
TLLTQFANGEADLLIGTQMLTKGLDLPQVTLVGVVAADGLLYLSDYRASERAFQTLAQVA
GRAGRGAEPGRVIVQSYTPEHPVIEAVQNHDYESFTATELEQRQALNYPPYGRLILLRLS
SLDPIEVQNVAQVIAAALPQQEGLDILGPAPANILRVANRYRWQILLKFAPDALPELPDW
EKVRELCPKSVSLTIDIDPINMM
NT seq
2592 nt
NT seq
+upstream
nt +downstream
nt
atgtatataaatgatgtaagtttacctcctttggtagtcgcccaatcaggggagtcttat
gataccagaataaataagaatcaatgggttgaagtgctagtagactgtccaggaattgcc
aaagaagatacaactgaacaaaaagaagaagaagaagaagaagaaaaactttacacctat
cgattaccagcagggttagaagtaaaaccaggagatattttaagtgtgccctttggcaga
caacaggtaggggggatagcgattcgtttgttagcacaaccaccagcaaagcttgcgccg
gaaaaaattagagatgtagaagatgtaatccactcaaaattttttcaagaaagctattgg
caattattggaaaaagtttcacactactattacactcccttgattcaagtgatacgtact
gccctaccaccaggtttgttggggcgatcgcagtctcgtttacggctcaaaagggaaaat
attcccaatggcgcgaatgaatttctcagtttaccagcgcgtgaaatcatcaaaattctt
caatcccaggctgatggcgactatagctttaaattcctcagacgtcagatcaaagggttc
gatagagcaaaaaagcagttaatccaacgcggttgggtagaaacctacatagaattgcct
agatactctcgaccccagacaaaacccatagtaacactgacagtaagtgtaccgccgatc
gacctcagcaagcgtcaacgagaaatactagaagtgttaaggcgtcatggcggagaatta
tggctcaatgattttttacaaatttgtaatacaaccactgctactttaaaaaaattagaa
gagcaaggttgtattgtcattcaacaaagagaagtattacgcagtgaaaacggccccaca
gtcgcagcagatcaaccaaagtctttaaatgcagctcaattccaggcattgtctaccatc
aaagaagtaaaagggtatgcaactcttctcttgcatggagtgactggttccggaaaaaca
gaaatttatttgcaagcgatcgcccctttactcgctcaaggaaagtccgccctcgtctta
gtaccagaaattggcttaacaccccagctaactgatcgtttccgtgctaggtttggcaac
aaaattaatgtttatcacagcgccctctccggcggtgaacgttacgacacctggcgacaa
atgctcacaggtgaaccccaaatagtgattgggacacgcagcgccgtttttgctcccttg
cccaacttgggtttaatcatattagatgaagaacacgataacagttttaaacaagattct
cccatccccacctaccacgcccgcaccgtcgcccaatggcgggcagaattagaaaattgt
cccttagttttaggttccgcaacgccgtctttggagagttgggtgagggtgagggattgg
ggatcgggacaagggggacaagaaggagtaaactctcctcacactttccctactcctcac
actccctctcactacctctgtctccccgaacgtatccactcccgccctttaccaacagtg
gaaatagtggatatgcggcaagagttacagcagggaaaccgttcgatatttagtagatct
ctacaaaatgccttgcagcaattaaaacaacagaatcagcagggaattttatttatccat
cgccggggacatagtacttttgtatcttgtcgcaattgtggatacgtgttggaatgtccc
cattgtgatgtatcgctggcgtatcatcaaaccgaggcagaagggccacaaattttgcgc
tgtcattactgtaattatgcgcgatcgcatccgagaaactgcccagaatgcagttctcct
tacttaaaattctttggtagtggcacacaaagagtcgcccaggaattaaccaagcaattt
ccagatttgcgttttatccgttttgatagcgatactacccgcaccaaaggttcccatcgt
accctactcacccaatttgccaacggtgaagcagatttattaatcggtacacaaatgctc
accaaaggattagatttaccacaggtgacgcttgtaggagttgtcgccgccgatggatta
ctatatttatctgattatcgcgctagcgaacgagcatttcaaaccttagcgcaggtggct
ggacgggctggtagaggtgcagaaccaggaagagtaattgtgcaaagttatacaccagag
catccagttatagaagcagtgcaaaatcatgactacgaatctttcaccgctacagaatta
gaacaacggcaagcactgaattatcctccctatggcaggttaattttattacggttgagt
agtctcgatccaattgaagtccaaaatgttgcccaagtaattgcagctgcattgccacaa
caagaaggtttagatatcttaggaccagcaccagctaatattttacgagtcgcaaatcgt
tatcgctggcagatcctgttaaagtttgcccctgatgcattgccagagttacctgattgg
gaaaaagtgcgtgaactctgtcctaaatctgtcagtttaacaatagatatagatccaata
aatatgatgtaa
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