Fischerella sp. NIES-3754: FIS3754_22480
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Entry
FIS3754_22480 CDS
T04195
Name
(GenBank) FliA/WhiG family RNA polymerase sigma factor
KO
K03090
RNA polymerase sigma-B factor
Organism
fis
Fischerella sp. NIES-3754
Brite
KEGG Orthology (KO) [BR:
fis00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
fis03021
]
FIS3754_22480
Transcription machinery [BR:
fis03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Sigma factors
FIS3754_22480
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma70_r2
Sigma70_r4_2
Sigma70_r3
Sigma70_r4
HTH_3
HTH_24
HTH_23
HTH_Crp_2
Sigma70_ECF
TnsD
LacI
Motif
Other DBs
NCBI-ProteinID:
BAU06335
UniProt:
A0A0S3TMP8
LinkDB
All DBs
Position
complement(2579537..2580319)
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AA seq
260 aa
AA seq
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METSQSSMRSDGMELLQLYHQNPSIELRNQLVKLHTGLVRKMAHKFSHQCNEPYEDLEQI
GYFGLIRAIERFDPSQGYAFSSFAVPYIRGEMLHFLRDRSTLLKIPRRWQELYNEGQKVR
KELAEILGRPPKDIEIAKQLKVSVQEWQETKLAAQNRMPLSLDATVVNYIDCQITLGEAL
PCPRSGTQQLQNEERQQLQGAISMLEEKPRMAVELVFLKELSRKDAAKKIGTSPMTVTRY
LQKGIQDLMSMLQTQALSTG
NT seq
783 nt
NT seq
+upstream
nt +downstream
nt
atggaaacaagtcagtcctctatgcggtctgatggtatggagttattgcagttataccat
cagaatccttctattgaacttcgtaatcagcttgttaaattacatactggcttagtacgg
aaaatggctcataagtttagccatcaatgtaatgagccttatgaagacttagagcaaatc
ggttactttggtttaatcagagcaattgagcgttttgatcccagccaaggatatgctttt
agttcctttgctgtcccatatattcggggtgagatgctgcactttttgcgcgatcgcagt
actctattaaaaattccccgtcgttggcaagaactctacaatgaggggcaaaaagttcgt
aaggaattggcggaaattttaggtcgtcctcctaaggatatagaaattgctaaacaactc
aaggtatctgtgcaagagtggcaagaaaccaaattagctgctcaaaatcgtatgccttta
agtttagacgccacggtagttaactacattgattgtcaaatcaccttgggagaggcgctt
ccctgtcctcgttctggcactcaacagctacaaaacgaagaacggcaacaactgcaaggg
gcaattagcatgttagaagaaaagcctcgcatggcagtagaactagtattcttgaaggaa
ctttctcgcaaagatgccgctaagaaaattggcactagtccaatgacagtcacacggtat
ctgcaaaagggaattcaggatttgatgtcgatgctgcaaacacaagcgttatcaacaggc
tga
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