Fischerella sp. NIES-3754: FIS3754_27150
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Entry
FIS3754_27150 CDS
T04195
Name
(GenBank) nuclease SbcCD, D subunit
KO
K03547
DNA repair protein SbcD/Mre11
Organism
fis
Fischerella sp. NIES-3754
Brite
KEGG Orthology (KO) [BR:
fis00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
fis03400
]
FIS3754_27150
DNA repair and recombination proteins [BR:
fis03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
FIS3754_27150
Archaeal homologous recombinant proteins
FIS3754_27150
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Paralog
GFIT
Motif
Pfam:
Metallophos
Metallophos_2
Motif
Other DBs
NCBI-ProteinID:
BAU06793
LinkDB
All DBs
Position
complement(3121013..3122383)
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AA seq
456 aa
AA seq
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MDNGEENDQLPITYYQLSMIKILHLADIHMGSGFSHGRINPDTGLNTRLEDFVKTLSHCI
DQALTQGVDLVIFGGDAFPDATPPPYVQEAFAGQFRRLVDAQIPTVLLVGNHDQHSQGQG
GASLCIYRTLGVPGIVVGDTLTTHRIQTRNGFVQVITLPWLTRSTLMTRQETEGLSLSEV
HQLLIERLQVVLEAEIRRLDPNIPTILLGHLMADNASLGAERFLAVGKGFLIPLSMLARP
CFDYVALGHVHRHQNLNKSNNPPVVYPGSIERVDFSEEKEDKGYVMVELERGSAKWEFCP
LPVRIFHTIEVDVSKAEDPQAAIVKAIAKYNIEDAVIRLIYKLRSEQLDLIDNAALHKLL
APAHTYTIQPELVSQLARPRVPELSASNSIDPIEALRTYLNNREDLKDIATSMLEAAHKL
LAADEENWIEPSSVEENTNQINQIKLDNTEHQLRLL
NT seq
1371 nt
NT seq
+upstream
nt +downstream
nt
atggataatggagaagaaaatgaccaattaccaatcacctattaccaattatctatgatt
aaaatcctccatcttgcagatatccacatgggaagcggtttctctcacggacgtattaat
cctgatacaggtttaaatacgcggttggaggattttgtcaaaactttgtctcattgtata
gaccaagcactaacgcagggcgtggatttggtcattttcggtggtgatgctttccctgat
gcgacaccaccgccttatgtgcaagaggcttttgctggtcagtttcgtcgtcttgttgat
gcccaaattcctacagtcctgttagtaggtaatcatgaccaacattcccaagggcagggt
ggagcaagtttatgtatttaccgcactttgggagtgccgggcattgtagtaggtgatact
ttaactactcaccgtattcaaactcgtaatgggtttgtacaagtcattactctaccttgg
ttgactcgttctacgttgatgactcgccaggaaactgaaggtttatctttaagcgaagtc
catcaactcctcattgaacgtctgcaagtagttttagaagcagaaattcgccgtcttgac
cctaatataccaacaattcttttgggtcatttgatggcagataatgctagtttgggggca
gagcgttttttggcagttggtaagggttttctcattcccttatcgatgttggcacgaccc
tgttttgattatgtagctttaggacatgtccaccgccaccaaaacttgaataaatcaaat
aatccaccggtggtttacccaggaagcattgaacgggtggactttagtgaagaaaaagaa
gataaaggctacgtaatggttgagttagaacgtggtagtgctaagtgggaattttgccct
ttgcctgtacggatttttcacaccattgaagtggatgtatcaaaggcagaagatccacaa
gcagcaattgtgaaagcgatcgccaagtataatattgaagatgcagtcatcagactaatt
tacaaacttcgttccgaacagttggatttaattgataacgccgcactccacaaactatta
gctccagctcatacctacactattcaaccagaattagtcagtcaattagctagaccgcgc
gtcccggaattaagcgctagtaatagtattgatcctatagaagcactcagaacataccta
aacaaccgcgaagatttaaaagatatagcaacatcaatgttggaagcagcgcataaatta
ctagctgcggacgaagaaaactggatagaacccagttcagtggaagaaaacaccaatcaa
ataaatcagattaaactagacaacacagagcatcaattacgattactttaa
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