Fischerella sp. NIES-3754: FIS3754_36150
Help
Entry
FIS3754_36150 CDS
T04195
Name
(GenBank) group 3 sigma 37-type sigma factor
KO
K03090
RNA polymerase sigma-B factor
Organism
fis
Fischerella sp. NIES-3754
Brite
KEGG Orthology (KO) [BR:
fis00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
fis03021
]
FIS3754_36150
Transcription machinery [BR:
fis03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Sigma factors
FIS3754_36150
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma70_r2
Sigma70_r4
Sigma70_r4_2
Sigma70_r3
HTH_3
HTH_Tnp_4
HTH_23
HTH_24
HTH_Tnp_ISL3
HTH_Crp_2
KORA
Sigma70_ECF
HTH_8
MarR_2
HTH_11
GerE
HTH_AsnC-type
HTH_30
HTH_17
HTH_10
HTH_31
SpoIIID
Xre-like-HTH
Tri-helical
AbiEi_4
HTH_28
HTH_50
LacI
Motif
Other DBs
NCBI-ProteinID:
BAU07682
UniProt:
A0A0S3TRI8
LinkDB
All DBs
Position
4184104..4184880
Genome browser
AA seq
258 aa
AA seq
DB search
MPTTLTHELKHEILQLLREYQQSHSANVRNQLVKLNFGLVRKEAHYWINQCHESYEDLLQ
VGCLGLIRAIERFEISKGHAFSSFAIPYIRGEIQHYLRDKGVTVRIPRRYLALQQQAIGV
SRSLREKYNRQPTDAELAAALEISIQEWQEIKLAWMNRAPLSLDVPVQDGEEGATSLGEL
VVDHRYRSFQLAQEDQIRLQQALFQLEKRTREVLEFVFLHDLTQKQVAEQLGISVVTVSR
RVKKGLDLLKQSMSVAED
NT seq
777 nt
NT seq
+upstream
nt +downstream
nt
atgccaactacactcacccatgaactgaagcatgaaattttacagctgctacgagaatat
cagcaatctcactcggcaaatgttcgcaatcaattggtaaaactcaattttgggctggtg
agaaaagaagctcactattggataaatcagtgccatgaaagttatgaagacttactccag
gtgggctgtctgggtttaattcgagcaattgaaagatttgaaatttctaaaggtcatgcc
ttcagttcttttgctattccctacattcggggtgaaattcaacattacctcagagataaa
ggtgtgaccgtaagaattccccgacgctacttagcgctgcaacagcaggctataggagtt
tcgcgttctttgcgggaaaaatacaatcgtcaaccaaccgatgcagaattagccgcagca
ctggaaatttccatccaggaatggcaagaaattaaattggcatggatgaatcgcgcccct
ttaagcttggatgtaccagttcaggatggagaagagggggctacttccttgggagagttg
gttgttgatcatcgctatcgtagttttcaactggcacaagaagatcaaattcgcttacaa
caagcgctgttccaactcgaaaaacgtacccgtgaagtcttagaatttgtgtttttacac
gatttaacacaaaaacaagtagcagaacagctaggtatcagtgttgtcactgtttctcgc
agagtcaaaaaaggactggatttgttgaaacagtcaatgagtgtagcagaagattaa
DBGET
integrated database retrieval system
