Fischerella sp. NIES-3754: FIS3754_36960
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Entry
FIS3754_36960 CDS
T04195
Name
(GenBank) putative helicase
KO
K16898
ATP-dependent helicase/nuclease subunit A [EC:
5.6.2.4
3.1.-.-]
Organism
fis
Fischerella sp. NIES-3754
Brite
KEGG Orthology (KO) [BR:
fis00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
fis03400
]
FIS3754_36960
Enzymes [BR:
fis01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
FIS3754_36960
DNA repair and recombination proteins [BR:
fis03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
AddAB pathway proteins
FIS3754_36960
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrD-helicase
AAA_19
UvrD_C
PDDEXK_1
UvrD_C_2
Viral_helicase1
AAA_30
AAA_22
Motif
Other DBs
NCBI-ProteinID:
BAU07761
UniProt:
A0A0S3TRU6
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All DBs
Position
4278756..4282022
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AA seq
1088 aa
AA seq
DB search
MSLTPQQQRAAYANGNVAVIAGAGTGKTHMLAERYLYHLQKSEFSPLEIVAVTFTDKAAA
ELRSRIRLLVSQKLPERSDLLAELEAAQISTIHALAMRICREHPQAADVPPDFTVLDELE
GVLWVNQWLDEALDTLPVELYEKVPYSLMSQTLQVLLQDPIAAEKALAQGAEKWQELAQE
LQQKALRELLQHPTWQQARTTLQNYAGQASDRLEVETRQPALQAMEAVDLKENITESLTV
IAGLKINIGSKKNWTDGGLEIVKETIKGLRNLVEKALKDGLVTLEFSVVDEQLKAILPAL
QEAFSSVQKYINQEKRRSRVLDFADLEVGALRALQDEQVQFYYAQRWRAFLVDEFQDTNP
VQSEILQRLTQNTLLTIVGDAKQSIYGFRRADVEVFRSWCDRITNSGGNEEVLTTSFRTH
KLLIDHINSIFTPLLGDLHQDLDAYRADCPNSYPPVQVYTVEAESDINKPQRLRVEAFHL
AKLLKQMLDDQTQVYDKKTQTLRPIQPGDIAILSRTWEPLAVYGEVLESVGVAVALAGGD
NLLATREAKDGWALLRFLADPSDDLALVAVLRSPFFAVSDRVLFTLIQSQEENDTTEQDE
QSKTNWWQKLKSSDIPELQRPVQVLSQLLRDRNLEPPTRLLQIANHLTGYTAVITNLPGA
ARREADWRGFVELVQQLEHGSSDVFAAVRRLKRLAAAEIEIPRLPLSANDAVALMTIHAA
KGLEWSVVVIPDLARSQPYTSETVYFDPAYGVALKLEDEQGETQKPVLYTCLEHLRKQRE
EAETLRVLYVALTRARDQLILTATDESGGSLSGLATGLAAAGISINTIPFNPELAQAPVP
PEPPLPSEPHSLLINSVGSGLFELPVTALSEYAQCPKKFAYRFIQGHPGIGSGVGTARRV
GTLAHLALERGIRDIETLAGFDVSLPKESVSEALQLAQRFEEVADFAQFQQGQWELPVNL
KVGSLTFNGIVDLLGDDWVLDFKTDQEIAPERHRFQLWAYAQATGCTNAHIAYLRHDYLH
TFSTEELQTTGQEAKILVQNILDGHFLANPSHTNCGFCVYQEICDERYQPTGEAAEKKHQ
IGATGYKK
NT seq
3267 nt
NT seq
+upstream
nt +downstream
nt
atgagtttgaccccacaacagcaaagagcagcctatgccaatggtaacgttgcagtcata
gcaggtgcgggaactggtaaaacccatatgctggctgaacgttacttgtatcatctgcaa
aagagtgagttttcacctttagagatagttgcagttacattcacagataaagctgctgcg
gagttgcgatcgcgcattcggcttttggtcagtcagaaattaccagaacggtctgacttg
ttggcagaactagaagcggctcaaattagtaccatccacgctttagcaatgcgaatttgc
cgggaacatccccaagctgcggatgtgccacctgattttacagttttagatgaactagag
ggagttctttgggtcaatcagtggttagatgaagccttggatactttacctgtcgagctt
tacgaaaaagttccttattctttgatgtctcaaactttgcaggtattacttcaagaccca
attgcggctgagaaagctttagcgcaaggggctgaaaaatggcaggaattggcacaggag
ttacagcaaaaagctctgagggaattgttgcagcatcccacttggcaacaagcacgcacg
actctacaaaattacgcaggacaagcaagcgatcgcttggaagtggaaacccgtcaacca
gccttacaggcaatggaggctgtagacttaaaagaaaatattacagaatcactaacagta
atagctggactcaaaataaatattggcagtaaaaagaattggacagatggcgggttagaa
attgtcaaagaaactatcaaaggactgcgaaatttagttgaaaaagctcttaaagatggt
ttagtaactctagaatttagtgtagttgatgagcagttaaaagctatactaccagcactg
caagaagcatttagctcagtacaaaaatatattaatcaagaaaaacgccgttctcgtgtt
ctggattttgcagatttagaagttggtgcactgcgagctttacaagatgaacaagtacag
ttttattatgctcaacgttggcgagcttttttagtcgatgaatttcaagatactaaccct
gttcagtcggaaatattacaacgactaacacaaaatactttactaactattgttggtgat
gctaaacaatcaatttatggctttcgccgtgcggatgtggaagtgtttcgtagttggtgc
gatcgcattactaatagtggtggaaatgaagaagttttaactactagcttccgcactcac
aaactactcatagatcacatcaacagtatatttaccccattactaggcgatttacaccaa
gatttagatgcttatcgcgcagactgccctaattcttaccccccagtacaagtttatacc
gtagaagctgagtcagatatcaataaacctcagcgtttaagagtagaagcctttcatcta
gcaaaactcctcaaacaaatgctagatgatcaaacccaggtttatgataaaaaaactcaa
acactccggccaatacagcctggagatattgcaatattgtcccggacttgggaacctttg
gcagtttacggcgaagttttggaaagcgtgggggttgccgttgctttggctgggggtgat
aatttactagcgacaagggaagctaaagatggttgggcattgttgcgttttttggctgat
cctagcgatgatttagctttagtagcagtgctgcgtagtccattttttgcagttagtgat
cgcgttctgtttactttaattcaaagtcaagaggaaaatgacaccacagaacaagacgaa
caatcaaaaactaactggtggcagaaactaaaatcatctgatattcctgaattacagcga
ccagtacaagtgttgagtcaactgttgcgcgatcgcaatttagaaccccctactcgcctt
ctacaaatagcaaatcatctaactggctacactgctgtcatcactaacttacctggtgca
gcaaggcgagaagctgactggcgaggttttgtagaattagtacagcaattagaacatggc
agtagtgatgtgtttgccgcagtacgtcgtctcaagcggttggcagcagcagaaatagaa
ataccccgtttacctttatcagctaatgatgcagtggctttaatgactatccacgctgct
aagggtttggaatggtcagtagtagttattcctgatttagctcgttcccaaccctatacc
agcgaaacagtttactttgaccctgcatacggtgttgctttgaagctagaggatgagcaa
ggtgaaacacaaaagcctgtgctatacacttgtttggagcatttgcggaaacagagggaa
gaagcagagactttacgggtactgtacgtagctttaacccgtgcgcgagatcaactaatt
ctgactgcaaccgatgaatcaggtggtagcttatctgggctggcaactggtttagcggct
gcgggaattagtataaatactattccttttaatccagaattagcacaagctccagttcca
ccagaaccacctttaccatcagaaccccatagtttgttaattaactctgttggctctggt
ttatttgaattgcctgtcactgctttaagtgaatatgctcaatgtcccaaaaaatttgca
tatcggtttatacaaggtcatccaggaattggctcaggtgttggcacagcaagacgagtg
ggaactttagcacacttggctttagaacggggtatccgcgacatagaaacactagcagga
tttgatgttagtctgccaaaagaatctgtcagcgaggctttgcagttagcacagcgattt
gaagaagtggcagattttgcccaatttcaacaaggacagtgggaattacctgtaaatttg
aaggttggatcgttgacttttaacggtattgtagatttgttgggggatgattgggtacta
gactttaaaactgaccaagaaatagctccagaacgtcaccgctttcagctttgggcttat
gcacaagcaacaggatgcactaatgcccatatagcctacctgcggcatgactatttgcac
acgtttagcactgaagaattgcaaaccactggtcaagaagcaaaaattttagtccaaaat
attttagatggacatttcctggctaatccttctcatactaattgtgggttttgtgtttat
caggaaatttgtgacgaacgttatcaaccaacaggtgaagccgcagagaaaaaacaccag
attggggcaaccgggtacaagaaatga
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