Fischerella sp. NIES-3754: FIS3754_37680
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Entry
FIS3754_37680 CDS
T04195
Name
(GenBank) exonuclease SbcC
KO
K03546
DNA repair protein SbcC/Rad50
Organism
fis
Fischerella sp. NIES-3754
Brite
KEGG Orthology (KO) [BR:
fis00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
fis03400
]
FIS3754_37680
DNA repair and recombination proteins [BR:
fis03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
FIS3754_37680
Archaeal homologous recombinant proteins
FIS3754_37680
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AAA_23
SMC_N
Rad50_zn_hook
SbcC_Walker_B
AAA_21
AAA_15
AAA_29
ABC_tran
PHM7_ext
RsgA_GTPase
Lumazine_bd_2
Motif
Other DBs
NCBI-ProteinID:
BAU07828
UniProt:
A0A0S3TS05
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All DBs
Position
4367881..4370910
Genome browser
AA seq
1009 aa
AA seq
DB search
MIPVQLTLKNFLSYRDATLDFRGLHTACICGANGAGKSSLLEAITWAIWGESRANSEDDV
VHTGEKEVRVDFVFRTSQQQTYRVIRTRARGGSSVLEFQIETPNGFRSLTGKGVRATQDV
ILQHIKLDYDTFINSAYLRQGRADEFMLKRPSERKEILAELLKLNQYDELEERAKDISRQ
FKAKAEELERSLESMKIQLQQRDAIATQRITLENELNQLQQVQAFENIKLQSLQVVQHQR
QNWEEQLNFVRQQYQNLTQDCDRLEQERGAVGSQLATLEELLAQEAQIKAGYSQYQNLQS
QEEATSAKFAEYTRAQTSRQQKQQQLSKQINEIERQLQQAQAQLEALHQQEAEIQQTLNK
SGEVEAALSQLAAARQRLAQLDELQLQVSPLLQQRATLQNQILRVQAGLVARLEQLEATQ
NQLQSQQRRQPQLQQAVMEVAMQIEELEKKRVYLQRVQEKGQERRNFIERLQAHQRDYER
LLGELEQKIQMLQTPNALCPLCERPLDEHHWNRVVDKTKSEYKDTEGQLWVVREQMAVSD
REIQVLRQEYRDISQQLSAYDTLREQRGQLAAKLQATTDAEQQLQDIAVQKQQLERSLQL
GEYAPDKQAELQRLEDYLQQLNYNEQDHALARSEVERWRWAEIKQGQIKDALKRQTQIEA
RKPELQAQIAQLQARIKQEAIDSECAKEIAALDCYIAELGYDTEQHNNIRLAVRKAQGWQ
LRYQQLQAAQQQYPQLKTRLQELEIALQARWTERQRLKNQIESIVSQLEETANPLEQIQA
LELQLTTRRRQLDEQISQLGRLEQMAHQLEMLQTQYEQQQQQQQQAKEQYRVYQELAQAF
GKNGIQTLMIENVLPQLEAETNQLLSRLSANQLHVQFVTQKAGRNGKATKKNSKLIDTLD
ILIADARGTRAYETYSGGEAFRINFAIRLALAKLLAQRAGAALQMLIVDEGFGTQDTEGC
DRLIAAINAIAPDFACILTVTHMPHLKEAFQARIEVNKSQQGSQLRLMV
NT seq
3030 nt
NT seq
+upstream
nt +downstream
nt
atgatccctgttcaactgactctgaaaaatttcctcagttaccgtgatgcaactttggat
tttcgcggcttgcatacggcgtgtatttgtggagcgaatggcgctggaaaatcttctttg
ttggaagctatcacctgggcaatttggggcgaaagcagagccaattctgaagatgatgtt
gtccacactggtgaaaaagaagttcgagtagatttcgtttttagaaccagccaacagcaa
acttatcgagttattcgtacccgcgctcgtggtggtagtagtgtgttggaattccaaatt
gaaaccccaaatgggtttcgctcactcactggtaaaggagtgagggcaactcaagatgtg
attttgcagcatatcaaactagactatgatacttttattaactctgcctacctgcgtcaa
ggtcgggcagatgaattcatgctcaagcgtccgagcgaacgcaaggaaatattagcggaa
ttattaaaacttaatcaatatgatgaattagaagaacgggcaaaagatatatcgcgtcag
tttaaagccaaagctgaagagttagaacgctctttggagtcaatgaaaattcaactgcaa
caacgagatgcgatcgcaactcaaagaatcaccttagaaaacgaactcaaccagctccaa
caagtacaagcctttgagaatatcaaacttcaaagtttgcaagttgtgcagcaccaacgg
cagaattgggaagaacaactgaattttgtcagacaacaatatcaaaatttaactcaagat
tgcgatcgcctagagcaagaacggggagcagttgggagtcagctagccacattagaagaa
ttattagctcaagaagcacagatcaaagccggatacagccaataccaaaatttgcaatct
caagaagaagccacaagtgccaaatttgcagaatacacccgcgctcaaaccagccgccag
caaaagcaacaacagctgagcaaacaaatcaacgaaatcgaaagacaactgcaacaagca
caagcgcaattagaagcattgcatcagcaagaggcagaaattcaacaaactctcaacaaa
tcaggtgaagtagaagcagctttgtctcaattagcagcagcacgtcaacgtctagctcaa
ttagatgaactgcaattacaagtgtctcccctgctgcaacaacgagcaactttacaaaat
caaatcctgcgggtgcaagcaggcttagtagcacgattagaacaactagaagcaacacaa
aaccaactacaatcgcagcagcgacgccaaccgcaactgcaacaagcagtcatggaagta
gcaatgcagattgaagagttggagaaaaagcgggtatatctgcaacgagttcaagaaaaa
ggacaggaacgccgtaactttatcgaacggctgcaagctcatcaacgcgattatgaaaga
ttgctgggagaactagagcaaaaaatccaaatgctgcaaactcccaacgccctttgtcct
ttgtgcgaacgacctttggatgagcatcactggaatcgagttgtagacaaaaccaaatct
gagtacaaagatacagaagggcaattgtgggtagtccgagaacaaatggctgtctcagac
agagaaattcaagtactcaggcaagaatatcgcgatatatctcaacaattatctgcctat
gacacattgcgagaacaaaggggacaactcgcagccaagttacaggcgacaaccgatgct
gaacaacaattacaagatattgcagttcaaaaacaacaactagagcgatcgctgcaacta
ggcgaatacgcacccgacaaacaagccgaactccaacggttagaagactatctacaacaa
ctcaactataatgaacaagaccacgccctggctcgcagtgaagtagaacgctggcgttgg
gcagaaattaaacaaggacaaattaaagacgcactcaagcgccaaactcaaatagaagcg
agaaaaccagaacttcaggcacaaattgcccagttgcaagcaagaattaagcaagaggca
attgattctgaatgtgctaaagaaatcgccgcccttgattgctatattgctgaacttggc
tacgacaccgaacagcacaacaacatccgcttggctgtacgcaaagcccaaggttggcag
ttacgctatcaacaactacaagctgcacaacagcagtatccgcaactcaaaactagatta
caagaattagagatagctttacaagcaagatggacagaacgacaaagactaaaaaatcaa
atagaaagtattgtcagtcaacttgaagaaacagccaatcctctggagcaaattcaagcc
ttagagctacaactcacaacccgtcgccgccaactcgacgaacaaattagccagttgggg
cgcttggaacagatggcacaccaactagaaatgctgcaaactcaatatgagcaacagcag
caacaacagcaacaagccaaagagcaataccgtgtttaccaggaactagcccaagctttt
ggtaaaaatggtatccaaacactgatgattgaaaacgtcctgccgcaactagaagcagag
acaaatcaactcctttcccgccttagtgccaatcagttacatgtacaatttgtgacacag
aaagccggacgtaacggtaaagctaccaagaaaaatagcaagttaattgatactttagat
attttgattgccgatgctaggggtacgagagcctatgaaacttactctggtggcgaagcg
tttagaattaacttcgcgattcgtttagctttggcaaaattacttgcacaacgcgccggg
gcggctttgcagatgctgattgtcgatgaaggctttggtacacaggatacagaaggatgc
gatcgcctgattgctgccattaatgcgatcgccccagattttgcttgtattctcactgtt
acccatatgcctcacctcaaagaagcctttcaagcgaggattgaagtgaataaaagccag
caaggttcccagttgcgtttgatggtttaa
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