Fischerella sp. NIES-3754: FIS3754_46850
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Entry
FIS3754_46850 CDS
T04195
Name
(GenBank) UvrD/REP helicase
KO
K03657
ATP-dependent DNA helicase UvrD/PcrA [EC:
5.6.2.4
]
Organism
fis
Fischerella sp. NIES-3754
Pathway
fis03420
Nucleotide excision repair
fis03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
fis00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
FIS3754_46850
03430 Mismatch repair
FIS3754_46850
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
fis03400
]
FIS3754_46850
Enzymes [BR:
fis01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
FIS3754_46850
DNA repair and recombination proteins [BR:
fis03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
FIS3754_46850
MMR (mismatch excision repair)
Other MMR factors
FIS3754_46850
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrD-helicase
UvrD_C
UvrD_C_2
AAA_19
AAA_12
AAA_30
Epimerase
DUF3138
Motif
Other DBs
NCBI-ProteinID:
BAU08732
UniProt:
A0A0S3TUF8
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Position
complement(5408214..5410550)
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AA seq
778 aa
AA seq
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MTTINHQPPTNNQTDPRLPLSSLRESAILKIRNSLRPGQQQMADWYSGPLAVSAVPGAGK
STGMAAAAAIAIARQYQRSNSSRSSERRQLVVVTFTRSAVANIKAKICKYLRDDLSLPQT
GFAVHTLHGLALNIASRHPNLSGLQLDNVTLITPTQSHRFIRTAVEQWIASHPGHYFRLL
EGIQFDGEETERLRRQSVLRTEVLPDLATTVIHEAKSSGMLPEDLRRFSEQTIDNYEILT
VAAGLYEQYQNLMRSRDFIDYDDMILAALRVLENPSARRIEQNQVFAVFEDEAQDSSPLQ
TKLLQILATDPNNPDQPNLIRVGDPNQAINSTFTPADPIYFREFCEDCNQKNRLATMDQA
GRSTKIIIDAANFVLQWVNSAYQAKSQNFPTPFRPQTIRLVDPDDPQTDANPQPVGRGLE
LYTPRDIHHTVQLLSQRVIELFAQAPNSFSAAILVRENRQGRWLAEALAPVCKEHQITLY
DVGERERHSHVPQEILALLQFCDRPHSPDYLKAALEVFVERQLIPTQDLNAPASVPEEFL
YPGPLSPPQPESVQKAAHLCRSLLRARMELPLYQLISFLALALNYDQAELATADKLAERV
NLQIASHASMTNMLGILSEIVSSERFEPVETEDLEARYTRRGQLTIITMHKAKGLDWDYV
FIPFVHENLIPGRFWVPPQSQFLGDFTLSEVARAQIRAALHNQASLPDVTQAWEQAKYLK
TAEEYRLLYVAMTRAKRLLWMSAAQKAPFTWSKPENLQASAPCPVFPALKRQFPECVV
NT seq
2337 nt
NT seq
+upstream
nt +downstream
nt
atgaccaccatcaaccaccaaccaccaaccaacaaccaaactgatcctcgcttgccctta
tcttctctgagagaaagtgcgattttaaaaattcgcaatagtctgcgtcccggacagcaa
caaatggctgattggtactctggaccattggctgtctctgcggttcctggtgctggtaaa
tctacgggaatggcggcggcggcggcgattgcgatcgctcgtcaatatcagcgttcaaat
tcttcgcgttcgtcggaacgtcggcagttggtagttgtaacatttactcgttctgctgtt
gctaatatcaaagcaaaaatctgcaaatacttgcgtgacgatttatctttacctcaaact
ggttttgctgtacatactctgcatggtttggctttgaacattgccagtcgtcatccaaat
ttgtcaggcttacaattagataatgtcacattaattacaccaacccaaagtcaccgcttc
atccgtactgctgtcgaacaatggattgctagccatccaggacattattttcgcttacta
gaaggtatacaatttgacggcgaagaaacagaaagattgcgtcgccagtcagtattgcga
acagaagtattgccagacttggcaacaaccgtgattcatgaggctaaaagttcgggaatg
ttgccagaagatttacgacgcttcagcgaacaaactatagataattatgaaattttaact
gttgctgccggattgtacgaacagtatcaaaatttaatgcgatcgcgcgactttattgac
tacgacgacatgattttagctgcactgcgagtactagaaaatcctagcgcccgtagaatc
gaacaaaaccaagtgtttgcggtttttgaagacgaagcccaagactctagtccactacaa
accaaactactacaaattctggccaccgaccccaacaaccccgaccaacccaacttgatt
cgtgtcggcgatcccaaccaagcgattaactccacctttacccccgcagacccaatttat
ttccgtgagttttgcgaagattgcaaccagaaaaaccgcttggcaacaatggatcaagca
ggacgcagcaccaaaatcatcattgatgctgccaatttcgtcttgcagtgggtcaatagt
gcctatcaagccaagagtcaaaatttccctacccccttccgtcctcaaaccattcgcctt
gttgatccagatgatccgcaaaccgatgcgaatcctcaaccagtcgggcggggactagaa
ctgtatactccgcgtgatattcatcacacagtacaattactttcacaaagagtaattgag
ttgtttgctcaagcgccaaattcttttagtgcagcaatattagttagagaaaaccgtcaa
ggtagatggttggcagaggcacttgcacctgtatgtaaagagcatcaaattacactttat
gatgtgggagaacgtgaacgccattcccatgtaccgcaagaaattttagcattactgcaa
ttttgcgatcgcccccattcacccgactatttgaaagcagctttagaggtatttgtagaa
cggcagttaattcctactcaagacctcaacgcccctgcttctgtacctgaagaattcttg
tatccaggccccttgtctccaccccaaccggaatcagtacaaaaagccgcgcacttgtgt
cggagtttactacgcgctcggatggaactacctctgtatcaactaatttccttcctggct
ttagcattaaattacgaccaagcagaactagcaactgctgacaaacttgcagaaagggtt
aatttgcaaatagctagtcatgcttccatgacaaacatgctgggtatcctgagtgaaatt
gtcagttccgaaagatttgaacccgtagaaacagaagatttagaagctcgttatacccgt
cgcggtcaattaacaattatcaccatgcataaagccaaagggctggactgggactacgta
tttattccctttgtgcatgaaaatttgatacccggtcgcttctgggttcctccccaaagc
caatttttaggagactttaccctatcagaagttgcgcgcgcccaaattcgcgctgcactt
cacaatcaagcgagtttaccagatgttacccaagcttgggagcaagcgaaatacctgaaa
acagctgaagagtatcgtttgctttacgtcgccatgacacgggcaaaacgcttgttgtgg
atgtctgctgctcaaaaagcgccttttacttggagtaaaccagagaatttgcaagcttca
gccccttgtccagtgttcccagccttgaagcggcaatttcctgagtgtgtagtctag
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