Faecalibacillus intestinalis: Fi14EGH31_01000
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Entry
Fi14EGH31_01000 CDS
T06868
Name
(GenBank) RNA polymerase subunit sigma-54
KO
K19505
sigma-54 dependent transcriptional regulator, gfr operon transcriptional activator
Organism
fit
Faecalibacillus intestinalis
Brite
KEGG Orthology (KO) [BR:
fit00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
fit03000
]
Fi14EGH31_01000
Transcription factors [BR:
fit03000
]
Prokaryotic type
Helix-turn-helix
Other families
Fi14EGH31_01000
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma54_activat
PRD
AAA
AAA_5
EIIA-man
Sigma54_activ_2
AAA_2
Mg_chelatase
RuvB_N
Torsin
AAA_7
AAA_22
DUF6434
AAA_16
Motif
Other DBs
NCBI-ProteinID:
BCL56388
UniProt:
A0A7I8DUY2
LinkDB
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Position
90957..93620
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AA seq
887 aa
AA seq
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MLLINGKMDQNSYDECQSTQLSKELKLGRNQVIRLLNELFNEKKLIKIKASPILYLSRAS
LESKYKKKLSSDEYKSLDELEAELNNQTELQNFEKLIGSNESMYQIVEKIKATVAYPPVG
LPMLFYGPTGTGKSFMAKLTYEYCVDTGLIDASKNFVQVNCSEYANNPELLTANLFGYKK
GAFTGADSDNLGLLHFADGGVLFLDEVHCLNAECQEKLFLYMDQGIYHLVGDNNKWYKSK
CRIIFATTEIPQKALLKTFLRRIPVILTIPSLAQRGENEKLELMYNFLKNEEKRINKTIL
ISSNVYELLLNHTFVGNIGELTNTIQASCVSALYKSNSDTLEIHAYDLPDSIRNSIDVSS
MIMKKHKLVSLNTLLPVSDQGIIKDFYQSLINIKRDTSFAINAQKTVDRYFEKLIFNDNR
AGSIDYLTNYLEKIFNNITEHYGFRTSHNELIALATYISEFSKNTYLTNNWINENYDEVK
NLKKYLKLEFHREYEIGQDVSHYLKNNMNQDIDDFVECIICICMIKYFAHSGEDLTIAVI
IAHGYSTASSIAEAANRMLNSYIFDAIDMPLDVDVQTITRKINDYIAHVGNISKLYLLVD
MGSLEEIYQGLDTSNADIALVNNINTKCALEIGQGIKFNKTVTEVIDSILKENIYKTHVE
LKKNKEPIVICSCASGLGAAHKIKEILFNSLPEDSNLKIITYDYPALIRKQVYDQLMNDY
EVVCVIGTLDPNIESMKYIGIQELIINEGQNAVEIYFGKYMKKEQMEIFEKNILRNFTLS
NVMNNLTILNPDKLLEHVAKAIDHLQNILHKRFKNRTCFGLYVHICCLVERLVTRQAISN
FTDQDFKEKHQEFIDQVNISMKEVKTYYNVEIPDEEIEYIYNYIIND
NT seq
2664 nt
NT seq
+upstream
nt +downstream
nt
atgttgttgattaatgggaaaatggatcaaaattcatatgatgaatgtcaatccacccaa
ttatcaaaagaattaaaactaggtagaaatcaagtgataagattattaaatgaacttttt
aatgagaaaaaacttattaaaattaaagcaagtcctatcttatatctttcaagagcttct
cttgaaagtaaatataagaagaaactttcatcagatgaatacaaatcattggatgaattg
gaagctgaattaaataatcagacagagttacagaactttgaaaagcttattgggtctaat
gaaagtatgtatcagattgttgagaagattaaggcaacagtagcatatccaccagttgga
ttaccaatgttgttttatggaccaactggtactggtaaatcatttatggctaaacttacg
tatgaatattgtgtagatacaggcttaattgatgcatctaagaattttgtacaggtgaac
tgttcagagtatgccaataacccagaactactcacagcaaacctatttggctataagaag
ggcgcatttacaggtgcagatagtgataacttaggtttattacattttgcggatggtggt
gtattattcctagatgaagtgcattgtttaaatgcggaatgccaagaaaaactattcctt
tatatggaccagggaatctatcacttagtaggtgataataataagtggtataaatcaaaa
tgtagaattatatttgcaacaacagaaataccacaaaaagcattattaaaaacattcctt
agacgtattcctgttattcttacaattccatctcttgcccaaagaggagaaaatgaaaag
ctagaactcatgtataacttcttaaagaatgaagagaagcgtatcaacaaaacaattctt
atttcatctaatgtctatgagttgttactgaatcatacatttgtaggtaatattggtgaa
ctgactaatacgattcaggcaagctgtgtgagtgcattatataaaagtaattcagatacg
ttagaaattcatgcttatgatttacctgacagtattagaaatagtatagatgtctcttct
atgattatgaagaagcataagcttgtgtctcttaatacacttcttcctgtatcagatcag
ggtatcattaaagatttttatcaatcattaattaatataaagagagatacttcatttgcg
ataaatgcacagaagactgtagatagatattttgaaaaattaatctttaatgataatcgt
gcaggttcaattgattatcttactaactatctagaaaagatatttaataatatcactgaa
cattatggctttaggacttcacataatgagttgatagcactcgctacatatatctcagaa
ttctctaagaatacatatctgacaaataactggatcaatgagaattatgatgaagtgaag
aacttaaagaaatatcttaaacttgaattccatcgtgaatatgaaataggacaggatgtt
tctcattacttaaagaataatatgaatcaggatattgatgactttgtagaatgtattatc
tgtatttgtatgattaagtattttgcacattctggtgaagatctcacaattgcggttatt
attgcgcatggttattcaactgctagttctattgcagaagcagccaatagaatgttgaat
agttatatatttgatgcgattgatatgccattagatgtggatgtacaaactattacaaga
aagatcaatgattacattgcacatgttggtaatatctcaaaactttatttattagttgat
atgggttctcttgaagaaatatatcagggattagatacaagtaatgcggatattgcctta
gtaaacaatattaatactaaatgtgcgttagaaataggacagggaattaaattcaataaa
acagtgactgaagtcattgattctattcttaaggaaaacatctataaaacacatgtagaa
cttaagaaaaacaaagaacctattgtaatctgttcttgtgcatcaggattaggtgcagcg
cataagatcaaagaaatcttattcaattctttacctgaagattctaatctaaagattatt
acttatgattatcctgctttaatacgtaaacaggtctatgaccagttaatgaatgattat
gaggttgtatgtgttattggaacacttgatcctaacattgaatctatgaagtatattggt
atacaggaattgatcattaatgaaggtcagaatgcggtagagatatactttggaaagtat
atgaaaaaagaacagatggagatatttgaaaagaatatcttacgtaatttcacattatcc
aatgtcatgaataacttaactatattaaatccggataaactacttgaacatgttgcgaaa
gcaattgaccatctacagaatatcttacataagagatttaaaaatagaacatgctttgga
ttatatgttcatatctgctgtcttgtagaaagattagttacaagacaggctatttcaaac
tttactgatcaagactttaaagaaaagcatcaagaatttatagatcaagtaaatatttca
atgaaagaagttaagacatactacaacgttgagattccagatgaagaaatagaatatata
tacaactatattattaatgattag
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