Faecalibacillus intestinalis: Fi14EGH31_04650
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Entry
Fi14EGH31_04650 CDS
T06868
Symbol
rpoC
Name
(GenBank) DNA-directed RNA polymerase subunit beta'
KO
K03046
DNA-directed RNA polymerase subunit beta' [EC:
2.7.7.6
]
Organism
fit
Faecalibacillus intestinalis
Pathway
fit03020
RNA polymerase
Brite
KEGG Orthology (KO) [BR:
fit00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
Fi14EGH31_04650 (rpoC)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
fit03021
]
Fi14EGH31_04650 (rpoC)
03400 DNA repair and recombination proteins [BR:
fit03400
]
Fi14EGH31_04650 (rpoC)
Enzymes [BR:
fit01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
Fi14EGH31_04650 (rpoC)
Transcription machinery [BR:
fit03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Core subunits
Fi14EGH31_04650 (rpoC)
DNA repair and recombination proteins [BR:
fit03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
DNA-directed RNA polymerase complex (RNAP)
Fi14EGH31_04650 (rpoC)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNA_pol_Rpb1_1
RNA_pol_Rpb1_5
RNA_pol_Rpb1_2
RNA_pol_Rpb1_3
RNA_pol_Rpb1_4
DUF5638
Motif
Other DBs
NCBI-ProteinID:
BCL56753
UniProt:
A0A2T3FWF3
LinkDB
All DBs
Position
458410..462069
Genome browser
AA seq
1219 aa
AA seq
DB search
MANTNKFSSIQIGLASPEKIREWSYGEVKKPETINYRSQKPEKDGLFCERIFGPSKDWEC
SCGKYKKIRYKGVVCDRCGVEVTKSAVRRERMGHIELATPVAHIWYLKGIPSRMGLILDM
SPKQLEEIIYFVSYVVIDKGTTPLEYKQVLSERDYRKCYEQFGHTFEAQIGAEAIQTLLK
QVDLDAEFELVSKELKEAQGQKRTKLLKRLEAIEAFRSSDNQPEWMILEALPVIPPDLRP
MLQLDGGRFATSDLNDLYRRVITRNNRLKKLLELGTPSIIVQNEKRMLQEAVDALIDNGR
RSKPITGAGGRALKSLSHTLKGKQGRFRQNLLGKRVDYSGRSVIAVGPDLKMYQCGIPRE
MALSLFKPFVIHGLVDQEIATNIKAAERLIDKMDDKIWPIVEEVIKAHPVLLNRAPTLHR
LGIQAFEPKLVEGRAIRLHPLVTPAFNADFDGDQMAVHVPLGEEAIQEARQLMLGSTNIL
GPKDGKPIVTPSQDMVLGNYYLTLEDVGAIGEGTVFADRNEVDHAYFAKTVNLHTRVAIK
ASALHNATFTEAQNNSYLITTVGKIFFNDIFDGQFPFINEPGKENLSGTPDRYFVPMGTD
IKAHIAAQQPVKPLGKKALGSIIDEVFKQSALTDTSLMLDKLKDQGFKYSTIAGITVSAY
DIQVPQAKFEIFDKADQKLEQIKTFYNKGKLTEAERYQSVIKLWTGVKDEVQEVVRQEFE
ADDRNPIFIMSDSGARGSLSNFTQLVGMRGLMSNPKGETIELPIKSAFREGLTASEFFIS
THGARKGSTDTALKTADSGYLTRRLVDVAQEVIISEEDCGTDRGFVVTELYNTDDNTVIV
PLYDRLVGRYSQKDVYHPETKELLVAAGEIFTEQNAKVVCDAGIKEVEIRSVLGCVAKGG
VCKKCYGRNLATGNVVELGEAVGVMAAQSIGEPGTQLTMRTFHDGGVAGGADITQGLPRI
QELFEARNPKAKSIISEIDGEVSNIIDNAGRMEVVVSNDLETRSYLTPYGAKLRVNVGDE
VRIGDKITKGSIDPKELLNVADTEAVENYIIKEVQKVYRIQGIEISDKHIEIIVRQMLKK
IRIVEGGDTGTLPGTHVNVTQFTELNREALKEGKHPAVGRPILLGITKASLETDSFLSAA
SFQETTKILTDASIKGKKDMLKGLKENVLIGKLLPAGTGFRGPLKSPETLAKEAEEAKAA
ELAKYDLLDDNHENLGDQI
NT seq
3660 nt
NT seq
+upstream
nt +downstream
nt
atggcaaatactaataaattttcatcaatccaaattggattagcatctcctgaaaaaatt
cgtgaatggtcttatggtgaagtaaaaaaacctgaaacgattaactatcgttctcaaaag
cctgaaaaagatggtctattctgtgaaagaatctttggaccatctaaggattgggaatgt
agttgtggaaaatataagaaaattagatataaaggtgttgtatgtgatcgatgtggtgta
gaagttactaaatctgcagtacgtcgtgaacgtatgggacatatcgaattagctacacca
gtagcacatatttggtatttaaaaggtattccatcaagaatgggattaatcttagatatg
tcaccaaaacaactagaagaaattatttattttgtttcttatgttgttattgataaagga
actacacctttagaatacaaacaagtattatctgaaagagattatcgtaaatgttatgaa
caatttggtcatacatttgaagctcaaattggggctgaagcgattcaaactttattaaaa
caagttgatttagatgcagaatttgaacttgtatctaaagaattaaaagaagctcaagga
caaaaacgtactaaattattgaagagattagaagctattgaagcatttagatcttctgat
aatcaacctgaatggatgattcttgaagcattaccagttataccacctgatttaagacct
atgttacaattagatggtggacgttttgcgacaagtgatttaaatgatttatatagacgt
gttattactcgtaataatcgtttgaaaaaattattagaacttggaacaccttctattatc
gttcaaaatgaaaaacgtatgttacaagaagctgttgatgccttaattgataatggtcgt
cgttctaaaccaattactggtgctggtggacgtgcgttaaaatcattaagccatacatta
aaaggtaaacaaggacgtttccgtcaaaacttattaggtaaacgtgttgactattcagga
cgttcagttatcgctgtaggaccagacttaaaaatgtatcaatgtggtattccacgtgaa
atggcattaagcttatttaaaccatttgttatccatggtttagttgatcaagaaattgct
acaaatattaaagcagctgaaagattaattgataaaatggatgataaaatttggccaatc
gttgaagaagttatcaaagcacatccagtattattaaaccgtgcgccaactcttcataga
ttaggtatccaagcattcgaacctaaattagtagaagggcgtgctattcgtcttcaccca
ttagtaactccagcgttcaatgccgatttcgatggggaccaaatggctgtccatgtacca
ttaggtgaagaagcaattcaagaagcaagacaattaatgttaggatcaacaaatatctta
ggtcctaaagatggtaaacctatcgttactccatcccaagacatggtgttaggtaactac
tacttaacattagaagatgttggagcaattggtgaaggtactgtctttgctgatagaaat
gaagttgatcatgcatattttgctaaaactgtaaatcttcatacaagagttgctattaaa
gcatctgcattacacaatgcaacatttacagaagctcaaaataacagttatttaattact
actgtaggtaaaattttctttaatgatatctttgatggacaattcccatttatcaatgaa
ccaggtaaagaaaacttatctggaacacctgatagatactttgttccaatgggaactgat
attaaagcacatattgctgctcaacaaccagttaaaccattaggtaaaaaagcattagga
agcatcattgatgaagtgttcaaacaatctgcattaactgatacaagtttaatgcttgat
aagttaaaagaccaaggatttaaatattcaacaatcgctggtattacagtatctgcttat
gatatccaagtgccacaagctaaatttgaaatctttgataaagcagatcaaaaacttgaa
caaattaaaactttctataataaaggtaaattaactgaagcagaaagatatcaaagcgta
atcaaattatggactggtgttaaagatgaagtccaagaagtcgttcgtcaagagttcgaa
gctgatgatcgtaacccaatcttcatcatgtctgattcaggtgcccgtggatcactttct
aacttcactcagttagtaggtatgcgtggattgatgtcaaatccaaaaggggaaacaatc
gagttaccaatcaagtccgccttccgtgaaggtttaacagcatcagaattctttatttca
acacacggtgcccgtaaaggttctacagatactgccttaaagactgccgattcaggttac
ttaacaagacgtttagtagacgttgctcaagaagttattatttctgaagaagattgtgga
acagatagaggattcgttgttactgaattatacaatacagatgacaatactgtaattgtt
ccattatatgaccgtttagttggtcgttattcacaaaaagatgtttaccatccagaaact
aaagaattattagttgctgcaggtgaaatctttactgaacaaaacgctaaagttgtttgt
gatgcaggtattaaagaagttgaaattcgttcagttcttggctgcgttgctaaaggcgga
gtttgtaaaaaatgttatggtcgtaacttagcaacaggtaatgttgttgaattgggtgaa
gctgttggggttatggctgcacagtcaatcggtgaaccaggtactcagttaacaatgcgt
actttccatgatggtggggttgccggtggtgccgatatcactcaagggttacctcgtatt
caagaattatttgaagcacgtaatccaaaagctaaatcaattatttctgaaattgatggt
gaagtatcaaatattattgataatgcaggaagaatggaagttgttgtttctaacgattta
gaaacaagaagttacttaactccatatggtgcaaaattaagagttaatgttggtgatgaa
gtacgtattggtgataaaatcactaaaggttctattgatccaaaagaattactaaatgta
gctgatacagaagctgttgaaaattatattattaaagaagttcaaaaagtatatcgtatt
caaggtatcgaaatttctgataaacatatcgaaattatcgtaagacaaatgttgaagaaa
attagaattgttgaaggtggagatactggaacacttcctggaacacatgttaatgtaact
caatttactgaattaaatagagaagcattaaaagaaggaaaacatccagctgttggtaga
ccaatcttattaggtattactaaagcatctcttgaaactgattcattcttatctgcagca
tcattccaagaaactactaagatcttaactgatgcatcaattaaaggtaagaaagatatg
ttaaaaggattaaaagaaaatgtattaattggtaaattattaccagctggtacaggattt
agaggtcctttaaaatcacctgaaacattagcaaaagaagctgaagaagcaaaagcagct
gaacttgctaaatatgatttattagatgataatcatgaaaatcttggagatcaaatataa
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