Faecalibacillus intestinalis: Fi14EGH31_17030
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Entry
Fi14EGH31_17030 CDS
T06868
Symbol
deaD
Name
(GenBank) DEAD-box ATP-dependent RNA helicase CshA
KO
K05592
ATP-dependent RNA helicase DeaD [EC:
5.6.2.7
]
Organism
fit
Faecalibacillus intestinalis
Pathway
fit03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
fit00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
Fi14EGH31_17030 (deaD)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
fit03019
]
Fi14EGH31_17030 (deaD)
03009 Ribosome biogenesis [BR:
fit03009
]
Fi14EGH31_17030 (deaD)
Enzymes [BR:
fit01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
Fi14EGH31_17030 (deaD)
Messenger RNA biogenesis [BR:
fit03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Helicases
Fi14EGH31_17030 (deaD)
Ribosome biogenesis [BR:
fit03009
]
Prokaryotic type
rRNA helicases
Fi14EGH31_17030 (deaD)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
DbpA
ResIII
CMS1
NDK
DeaD_dimer
AAA_22
Terminase_6N
DsrH
Motif
Other DBs
NCBI-ProteinID:
BCL57991
UniProt:
A0A2T3FW44
LinkDB
All DBs
Position
complement(1637698..1639281)
Genome browser
AA seq
527 aa
AA seq
DB search
MNKFEKLGLSEELLKSINELGFEKPTPIQENIIPVILEGYDVIGQAQTGTGKTLAFSSIL
LTNLKERKKKPQAYILSPTRELTMQIHEELKKLGKYSSLRFACVYGGSGIEKQIKSIKKG
VDIVVGTPGRMMDLMRRKVLQLDEVSYVVLDEADEMLNMGFVEDIETIISKTNPEHTTML
FSATMPEGIKKIAKNYMKPDYKHIQVKQKTVTANTVKQYYFEVKQKDRFETLCRIIDSET
VQSGIIFCRTKRSVDEVTEQMQKANYNVEAMHGDLNQDHRMRTLKKFKEGTIHYLIATDV
AARGIDVENISHVINYELPQEVDLYVHRIGRTGRANREGKAYTIVVGKEERYLKEIERKT
KSHIEKLEVPTLTQIHQHKVTELMYKLEDMILHGEHKPMKDLVNQIENHMLKDVTAALIE
LSLNQQIGFPYTKEKLESSSKRKKGASEGYTRLFLTVGSMDKAKKKDIIHFLVSKANIRE
SDIQGIDIKRKFTFVNINDKAVKKVMRHCQKEKLNGRKVEIEQANSR
NT seq
1584 nt
NT seq
+upstream
nt +downstream
nt
atgaacaaatttgaaaaattaggattaagtgaagaattattaaaatcaatcaatgaatta
ggttttgaaaaaccaacacctattcaagaaaatattatccctgttattttggaaggctat
gatgtcattggacaagcacaaacaggaacaggaaaaactttggcgttttcaagtatttta
cttacaaatttaaaagaaagaaaaaagaaaccacaggcgtatattttatcaccaacaaga
gaacttaccatgcaaattcatgaagaattaaaaaaacttggaaaatacagttctttacgt
tttgcttgtgtatatggtggtagtggtattgaaaaacaaattaaatcgattaaaaaaggt
gttgatattgtcgtaggaacaccgggaagaatgatggatttaatgagacgtaaagtcctt
caactagatgaagtttcttacgtggttttagatgaagctgatgaaatgttgaatatggga
tttgtagaagatattgaaacgattatttctaagacaaatccagaacatacaacgatgttg
ttttctgcaacaatgccagaaggtattaaaaaaattgcgaaaaattatatgaaaccagat
tataagcatattcaagttaaacaaaaaacagtgacagctaacacagttaaacaatattac
tttgaagttaaacaaaaagaccgttttgaaacattatgccgtattattgatagtgaaacg
gtacaatcaggaattattttctgtcgtactaaaagaagcgttgatgaagtaacggaacaa
atgcaaaaggctaactataatgtagaagcaatgcatggtgatttaaatcaagatcatcgt
atgcgaactttaaagaaattcaaagagggaacaattcattatttaattgccacagatgtt
gccgctagagggattgatgtagaaaatattagccatgttattaattatgaattacctcaa
gaagtagatctttatgtacatcgtattggtcgtacaggtcgtgcgaatcgtgaaggaaaa
gcctatacaattgttgtaggaaaagaagaacgctatttaaaagagattgaaagaaaaaca
aaatctcatattgaaaaattagaagtaccaacattaacacaaattcaccaacataaagta
acagaattaatgtataaattagaagatatgattttacatggagaacataaaccaatgaaa
gatttggtaaatcaaattgaaaatcatatgttaaaagatgtaacggcagctttaatagaa
ttatctttaaatcaacagattggttttccttatacgaaagaaaaacttgaatcttcatca
aaacgtaaaaaaggtgcaagtgaaggttatacacgtttatttttaacggtaggatctatg
gataaagcaaagaaaaaagatattattcatttcttggtctcaaaggcaaatattagagaa
agtgatattcaaggaattgatattaaaagaaagtttacgtttgtaaatattaatgataaa
gctgtaaaaaaagtgatgagacattgtcaaaaagaaaaattaaatggacgaaaagtagaa
atagagcaagcaaatagccgttag
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