Fructilactobacillus ixorae: M8332_02635
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Entry
M8332_02635 CDS
T08281
Name
(GenBank) DEAD/DEAH box helicase
KO
K18692
ATP-dependent RNA helicase CshB [EC:
5.6.2.7
]
Organism
fix
Fructilactobacillus ixorae
Brite
KEGG Orthology (KO) [BR:
fix00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
fix03019
]
M8332_02635
03009 Ribosome biogenesis [BR:
fix03009
]
M8332_02635
Enzymes [BR:
fix01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
M8332_02635
Messenger RNA biogenesis [BR:
fix03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Helicases
M8332_02635
Ribosome biogenesis [BR:
fix03009
]
Prokaryotic type
rRNA helicases
M8332_02635
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
ResIII
CMS1
Motif
Other DBs
NCBI-ProteinID:
USS93764
LinkDB
All DBs
Position
559930..561291
Genome browser
AA seq
453 aa
AA seq
DB search
MSAAFKDYHFQPFIMDALTDLGFQRPTPIQAQVIPTIQHGKSLVGKSATGSGKTHAFLLP
LFDQLDPTDQQPQLVITTPSRELAYQIYENIKQLVRFSPATLHVENYVGGTDKERQLEKL
DREQPQVIVGTPGRILDIVKSGKLAINAAQRLVIDEADMTLDLGFLADVDQIAARMAKEL
QIMVFSATIPPKLQPFLCKYLKNPVITDIPTEHVINGDVSNWLISTKGKDKNQLIAQLLT
MGNPYLALVFTNTRTRADELAANLQAQGLKVATLHGGMQPRVRKRVMKQIQNLDFQFVVA
TDLAARGINIPGVSLVLNDDVPTDPEYFVHRVGRTGRNGMPGTAITLYTPDEEAKIAELE
AKGVQFQPKEIKHGEVVDTYDRRRRQQYRGHHNRLDGSTLGMIKKKKQQVKPGYKKKIKR
AIKLKDDQNRKVELRQQIRAKKKQKKRSSQRYQ
NT seq
1362 nt
NT seq
+upstream
nt +downstream
nt
atgagtgctgcttttaaagattatcattttcaaccctttattatggacgcgctaacggac
ctgggctttcaacgccccacgcccattcaggcgcaggtcattcccacgattcagcacggc
aaaagtctcgtaggtaaatcggcaactgggagtgggaagacccacgccttcctgttaccg
ttatttgaccaactggatccgactgaccagcaaccgcagttggtaattaccacccccagc
cgggaactggcttatcaaatttacgaaaacatcaaacaactcgttcgttttagtccggcc
acgcttcacgtggaaaactacgtgggtggaaccgataaggagcggcaactagaaaaatta
gaccgcgaacaaccccaggtgattgtcgggacgccgggacggattttagacatcgttaag
agtggaaaattagcaatcaacgcggcccaacggttggtaattgatgaagctgatatgacg
ctcgacttaggttttttagcggacgttgaccaaatcgccgcccggatggcaaaggagtta
cagatcatggttttttcggccacgattccacctaagttacagccgttcttgtgcaagtac
ctgaagaatccggtgattactgacattcctaccgagcacgtgatcaatggcgatgtttcc
aactggttaatctccacgaaggggaaagataaaaaccagctaattgcccagttacttacg
atggggaatccctatcttgcgctggtattcacgaatacgcgaacccgcgcggatgagctg
gccgcgaacctgcaagcgcagggcttaaaggtggcgaccctccatggcggtatgcaaccc
cgggtacgaaagcgggtcatgaaacagattcaaaacctagattttcagttcgtagttgcg
accgacctcgcggcacgggggattaacatccccggcgtttcgttggtgcttaacgatgat
gtgccgaccgatccagagtactttgtgcaccgggttggccggactggacgcaacggaatg
cctgggacggccatcaccctgtatactccagatgaggaagcaaaaattgctgaattagag
gccaaaggagtccagtttcaaccaaaggaaatcaaacacggtgaagtggttgatacgtat
gaccggcgccgtcggcaacagtaccgcgggcaccacaatcggttagacgggtctaccctc
ggaatgattaagaaaaaaaagcaacaggtcaagccgggctataaaaagaaaattaagcgt
gccattaaactgaaggatgatcagaaccgaaaggtcgaacttcggcagcaaattcgcgcg
aaaaaaaagcagaaaaagcgcagttcacaacgctatcaataa
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