Fructilactobacillus ixorae: M8332_03960
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Entry
M8332_03960 CDS
T08281
Symbol
truB
Name
(GenBank) tRNA pseudouridine(55) synthase TruB
KO
K03177
tRNA pseudouridine55 synthase [EC:
5.4.99.25
]
Organism
fix
Fructilactobacillus ixorae
Brite
KEGG Orthology (KO) [BR:
fix00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
fix03016
]
M8332_03960 (truB)
Enzymes [BR:
fix01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.25 tRNA pseudouridine55 synthase
M8332_03960 (truB)
Transfer RNA biogenesis [BR:
fix03016
]
Eukaryotic type
tRNA modification factors
Psudouridine synthases
M8332_03960 (truB)
Prokaryotic type
M8332_03960 (truB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TruB_N
TruB_C_2
Motif
Other DBs
NCBI-ProteinID:
USS92796
LinkDB
All DBs
Position
complement(812506..813417)
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AA seq
303 aa
AA seq
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MVNGIIPLYKPVGSTSFDCVSQVRKIVHQKKVGHSGTLDPSVDGVLPICLGNGTKVVDYL
MASGKTYRGSITLGFATTTEDLDGEIIAEQPHFQPLTQAQIKHGLHHFVGTIHQIPPMYS
AVKVNGRRLYDYARRGETVTRPQRTVQVTEFTQLGEAIVDEATGTQTIFFEVHCGKGTYV
RTLAVDFGRLFGLPAVMSQLTRVASGGFDIQQTVSFATLAAAQATGHLEDLVYPIDHALQ
AFAQVELTNEQWQRVQHGGFLAPSELNSTEAEVVLRYNGEDKALYYYNEKHHQYQPQKMF
SLE
NT seq
912 nt
NT seq
+upstream
nt +downstream
nt
atggtaaatgggattattcccctctataaaccggtagggagcaccagttttgattgcgtg
agtcaggtgcgtaagattgtacaccaaaaaaaagttgggcacagtgggacgttggatccc
agtgtcgacggggtcttgccgatttgccttgggaatgggaccaaggtggttgactactta
atggcatcgggaaagacctatcgtgggtcaattacgcttggctttgcgacaaccacggag
gatcttgacggagaaattattgcagaacaaccccattttcaaccgctcacgcaagcccag
attaaacacgggttacaccactttgttggaaccattcaccagattccacccatgtattcg
gcggtgaaagtaaacggacgccgcttgtatgattatgctcggcggggggaaacggtcacg
cgtccacaacgaaccgtgcaggttacggaatttacccaacttggcgaagccatcgttgac
gaagcaaccggcacccaaaccatcttttttgaggttcactgcggaaaagggacctacgtg
cgcactctggccgttgatttcggtcggctatttggacttccagccgtcatgtcccagctc
acgcgggtggcgagcggtggctttgacattcaacaaacggtttcctttgctaccctagct
gctgctcaagcaactggtcacctagaggacctagtttatccgattgatcatgcactgcag
gcctttgcgcaggttgagctgacaaacgagcagtggcagcgagttcagcacggcggcttt
ctcgctcccagtgaattgaacagcactgaagcagaggtggttttacggtataatggggaa
gataaggcgttatactactacaatgaaaagcaccaccagtatcaaccacaaaaaatgttt
agtttggagtaa
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