Fructilactobacillus ixorae: M8332_04340
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Entry
M8332_04340 CDS
T08281
Symbol
holA
Name
(GenBank) DNA polymerase III subunit delta
KO
K02340
DNA polymerase III subunit delta [EC:
2.7.7.7
]
Organism
fix
Fructilactobacillus ixorae
Pathway
fix03030
DNA replication
fix03430
Mismatch repair
fix03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
fix00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
M8332_04340 (holA)
03430 Mismatch repair
M8332_04340 (holA)
03440 Homologous recombination
M8332_04340 (holA)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
fix03032
]
M8332_04340 (holA)
03400 DNA repair and recombination proteins [BR:
fix03400
]
M8332_04340 (holA)
Enzymes [BR:
fix01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
M8332_04340 (holA)
DNA replication proteins [BR:
fix03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
M8332_04340 (holA)
DNA repair and recombination proteins [BR:
fix03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
M8332_04340 (holA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol3_delta_C
DNA_pol3_delta
DNA_pol3_delt_C
DNApol3-delta_C
AAA_assoc_2
Motif
Other DBs
NCBI-ProteinID:
USS92866
LinkDB
All DBs
Position
complement(891214..892248)
Genome browser
AA seq
344 aa
AA seq
DB search
MAVNQAIEQISQKPQPVYLVLGRNEYWESRIMHQVQQLIPEAERTMNYATYDLEETPLAV
ALNDAWSVPFFGDRRVVVMQNATFLTGAKPKMSGKHDVDELIKYLQAQPAETVLVIFAPY
EKIDNRKKVVKQLKKSATVIDLNAVSERETTQFVQQFIEKQQYQIEPDALTELLARTQGD
LAQIMNELQKLLLFCQDERTITATVVDQLVPKSMMQNVFELVNDLLAGKTNAAIQFYHDL
VTQREEPLKINAILEGQFRLLLQVKILRGQGQSQSMMAQKLKVHPYRIKLAERLLNRFTR
KYLEQAYLALVAIEHQLKSSSANPELLFEMFAIRFSQTKAKKNT
NT seq
1035 nt
NT seq
+upstream
nt +downstream
nt
atggcagtgaaccaagcaattgaacaaattagtcaaaagccccagccggtgtatctagtg
ctaggcagaaatgagtattgggaaagccgaattatgcatcaagtgcaacaactcatccca
gaagcagaacgaacgatgaactatgctacgtatgatttagaggaaacgcccctagccgtg
gctttgaatgatgcctggtcggtgcctttttttggtgaccggcgggtggtcgttatgcag
aacgctacgtttttgacgggcgctaagccaaagatgagcgggaaacacgatgttgatgag
ctaattaagtacctgcaggcgcaaccagcggagacggtgttggtgatttttgctccctac
gaaaaaattgataaccggaaaaaggtggttaagcaactcaagaaaagtgccaccgtcatt
gatttaaacgcggtttctgagcgtgaaacaacgcagtttgtccaacagtttatcgaaaag
cagcagtatcaaattgagcctgatgccctcacggagttgttagcccgaacgcagggggac
ttagctcagattatgaatgagctccagaaattactgctcttttgccaggatgagcggacc
attaccgcgacggttgtggatcagttggttccaaagtccatgatgcaaaatgtgttcgaa
ctcgtgaacgacctattagctggtaaaaccaacgcggccattcagttttaccacgatttg
gtaacccaacgtgaggagcctttaaaaattaatgccattttggagggccaatttcggttg
ttactacaggttaagattttgcgaggtcaaggacagagccagagtatgatggcgcagaaa
ttaaaggtccatccatatcgaattaaactggccgaacggttacttaatcggtttacccgg
aagtatttggaacaagcgtacctcgcgttggttgccattgagcaccaactaaaaagcagc
tcggctaatccagagctgctctttgaaatgtttgcaattcgttttagtcaaacaaaggcg
aaaaaaaacacttag
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