Fructilactobacillus ixorae: M8332_04430
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Entry
M8332_04430 CDS
T08281
Name
(GenBank) ATP-dependent RecD-like DNA helicase
KO
K03581
exodeoxyribonuclease V alpha subunit [EC:
3.1.11.5
]
Organism
fix
Fructilactobacillus ixorae
Pathway
fix03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
fix00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
M8332_04430
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
fix03400
]
M8332_04430
Enzymes [BR:
fix01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.11 Exodeoxyribonucleases producing 5'-phosphomonoesters
3.1.11.5 exodeoxyribonuclease V
M8332_04430
DNA repair and recombination proteins [BR:
fix03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
M8332_04430
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
AAA_30
AAA_19
HHH_RecD2
SH3_13
OB_YrrC
UvrD_C_2
AAA_11
Viral_helicase1
AAA_22
UvrD-helicase
DUF815
KAsynt_C_assoc
TsaE
UvrD_C
AAA_16
AAA
IMS_HHH
T2SSE
SLFN-g3_helicase
AAA_12
nSTAND3
AAA_28
RsgA_GTPase
AAA_29
NPHP3_N
HTH_IclR
AAA_17
Gal11_ABD1
NTPase_1
RuvB_N
WHD_MCM4
Zeta_toxin
AAA_23
Motif
Other DBs
NCBI-ProteinID:
USS92884
UniProt:
A0ABY5C285
LinkDB
All DBs
Position
complement(908099..910567)
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AA seq
822 aa
AA seq
DB search
MAQSISLFDEHHPEDQPTTAQLTGKVATTFFEGNDSFYKVLLVQVEEHNFQWDEPEIVVT
GDFAEINDELSYRFSGKLVDHPKYGKQFQARNYERATQTSTAGLIKYLSGSDFPGIGPKT
ATKVVNQLGTELIPKLLKDPDALNGLGLKPQQRDTILQTIRQNNGAEQVIVGLNSYGFGS
SLAAAIFKKYHEQALEIIETDPYRLVEEIANISFKRADQIAQRVGIDYNNPGRLRAGLLT
TLDRLSVSSGNTYSTTTEVMNASFQILDTDPNQTIDDQQLATALKQLVQDGKVQVDQDRI
YLKNLFQAEWQIAENVHRILQAADAAPADPKQLISQVEQASHIQYDVSQVQAIESALSHA
LFLLTGGPGTGKTTIINGIVQAYATAHDLSLDPHDYRGDDPYPILLAAPTGRAAKKMGEA
TGLPASTIHRLLGLNGDDTEATGNALDGELLIIDEMSMVDTELFTKLVQAIPTGMKVILV
GDQDQLPSVGPGQVFSDLIRSQLIPTMQLTQIHRQSRDSTIITLAHQLKDGLVPPDLLTK
KPDRSFIQCDVRQAVSVIEQIVSKAQAKDFQATDIQVLAPMYRGEVGIDHLNQAVQAIFN
PPSAERKQVETARGCFRIGDKVLQLVNDPEHNVFNGDIGKIVGLTINSEGKQYLDKLTVA
FDQTEVTYPRNDWKQLTLAYCTSIHKAQGSEFPMVILPVVSPYRRMLDRNLLYTAVTRAA
SKLVLVGDASIFQAALAKEASRRKTGLPDRLRSAFQSEPESATTSPATTTTTAAMEPQPV
DPATNAEQDAVLTMAAIERQAIDPMIGMAGVTPQNFLDAKSQ
NT seq
2469 nt
NT seq
+upstream
nt +downstream
nt
gtggcacagtcaatcagtctttttgatgagcaccacccagaggaccaaccaaccaccgca
cagttaactggcaaggttgccacgaccttttttgaaggaaatgatagcttttataaggtg
ttattggtccaggtggaagaacacaattttcagtgggatgaaccagaaattgtggtaacg
ggtgactttgctgaaattaacgacgagctgagttaccggtttagcgggaaactggtggat
catcccaaatatgggaagcagtttcaagccagaaactatgaacgggcaacgcaaacctcg
accgccggtttgattaaatacttatccgggagtgatttcccggggattggtccaaagact
gctaccaaggtcgttaaccagctgggaacggagttaatcccgaaactattaaaggatccg
gacgctttaaacggcttggggttaaaaccccagcagcgggacacgattttacagaccatc
cggcaaaataacggagccgaacaggtgattgtcggcctcaatagctatgggtttggcagt
tcgttagcagccgcgattttcaaaaagtatcatgaacaggcactagagatcattgaaact
gatccgtatcggctagttgaagagattgcaaacattagctttaagcgggccgatcaaatt
gcccaacgagtagggattgactataacaatccgggccggttacgggcggggttactaacc
accttggaccggttgtcggttagtagtgggaatacctactccacgacgacggaagtgatg
aacgccagctttcaaattttagataccgatccgaaccaaacgattgacgaccagcaacta
gccacggcgttaaaacaactggtgcaggacggtaaggtgcaggtcgatcaggaccgcatt
tacctaaaaaacctctttcaggcggaatggcaaattgctgagaacgtgcaccgcatttta
caggcggcggatgctgctccagctgatcctaaacaattgattagtcaggtggaacaagcg
agtcacattcagtacgacgtttctcaggttcaggcgattgaatcagcactgagtcatgcc
ctgttcctcctgaccggaggacccgggactggaaaaacgacgattattaatgggattgtg
caggcctatgccaccgcccacgacttatcgttagatccccatgactatcgtggggatgat
ccctatcccatcttgctagcagctcctaccggccgggcggctaaaaaaatgggggaagcg
acgggcttaccggccagcaccattcaccgcttgttaggattaaacggcgacgacacggag
gccactggaaacgcccttgacggagagttattaatcatcgatgagatgtccatggtggat
accgaactgtttactaaactcgtgcaggcaattccaaccgggatgaaggtgattttggtc
ggggatcaagaccagttgccatccgttggaccgggccaggttttttcggatttaattcgg
tcccagttgattccaacgatgcagctaacgcaaattcaccggcagagtcgggattcgacc
attattaccctagcccaccagttaaaggacgggcttgttcctcccgatttactgactaaa
aaaccggaccggagtttcattcagtgtgacgtgcgccaagcagtatcagtcattgaacaa
atcgttagtaaggcgcaggcgaaagactttcaagccactgatattcaagttttagctccc
atgtatcgaggtgaggtgggcattgatcacctcaatcaagcagtccaagccatttttaat
ccacccagtgccgagcgcaaacaggtggaaacggctcgcggttgctttcgaatcggggat
aaggtcttacaactggttaatgatccggaacataacgtgtttaacggagacattggcaaa
atcgtgggcctcaccattaattccgaaggcaagcagtacctcgataaactaacggtggcc
tttgaccagacggaagtaacctatcccagaaatgactggaagcagttaactttggcgtac
tgtacttcgattcataaagcgcagggaagcgagtttccaatggtgattttaccggtcgtt
tcaccataccgccggatgcttgatcggaacttgttgtacacggcagtaactcgggcggcc
agtaaactggtcctcgttggtgatgccagtatttttcaagcggcgttagccaaagaggcg
agccgtcgcaaaaccggattacctgaccgcctacgctccgcgtttcaaagtgaaccggag
tccgctaccacctcaccagcaaccaccacgaccactgcagccatggagccccaaccagtg
gatccagcaacgaatgcggagcaggacgcggtgttaacgatggccgccattgaacggcag
gccatcgatcccatgattgggatggcaggggtgacgccccaaaattttcttgatgctaaa
tcacagtga
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