Candidatus Filomicrobium marinum Y: BN1229_v1_1101
Help
Entry
BN1229_v1_1101 CDS
T03857
Name
(GenBank) putative enzyme
KO
K03215
23S rRNA (uracil1939-C5)-methyltransferase [EC:
2.1.1.190
]
Organism
fiy
Candidatus Filomicrobium marinum Y
Brite
KEGG Orthology (KO) [BR:
fiy00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
fiy03009
]
BN1229_v1_1101
Enzymes [BR:
fiy01000
]
2. Transferases
2.1 Transferring one-carbon groups
2.1.1 Methyltransferases
2.1.1.190 23S rRNA (uracil1939-C5)-methyltransferase
BN1229_v1_1101
Ribosome biogenesis [BR:
fiy03009
]
Prokaryotic type
rRNA modification factors
23S rRNA modification factors
BN1229_v1_1101
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
tRNA_U5-meth_tr
MTS
Cons_hypoth95
Methyltransf_31
BpsA_C
TRM5-TYW2_MTfase
MethyltransfD12
Methyltransf_25
FtsJ
zf-C3HC4_3
Motif
Other DBs
NCBI-ProteinID:
CPR17094
UniProt:
A0A0D6JD70
LinkDB
All DBs
Position
1:1017180..1018424
Genome browser
AA seq
414 aa
AA seq
DB search
MGDIEELEIAKLGAQADGVSERASGSVFVPYALPGELIRAEIQGTRARLVEVLRASPDRV
VPPCRHFTACGGCAIQHLAYEKYTAWKRETVAGAFAARGLDLEVADPVAVGHGARRRAVF
SASRDGREVALGFHAANSHDVIDLTECLVVDPGIVQVLPELKAFLAPLVASKGEARVTVI
AASNGFDVSVDVDGLGTELPPGQRARLAAGAAELKLLRFSLNGDPVYQSAVPFVTMGAAH
VVPPPGVFLQASADAEAAMASLIVEALPKRAKRAVDLFSGMGAFSFALAARVKVLAVDSD
KRAIEALDEARRHAQGIKPIETKVRDLMREPLSRKELEGFDLAVFDPPRAGAQAQAEMLA
KSKVPAVVAVSCNPATLARDARILIDGGYRATRIIPVDQFLYSPHVEVVAVFTR
NT seq
1245 nt
NT seq
+upstream
nt +downstream
nt
atgggtgatatcgaagaactggaaatcgcgaaactgggtgcacaggccgacggcgtctct
gagcgcgcgtctggctcggtgttcgtcccctatgcccttcccggagaactcatccgcgcc
gaaatacagggcacacgtgcacgcctcgtcgaggtgttgcgagcctctcccgaccgcgtg
gttcccccctgccggcatttcacggcttgtggaggttgcgccatccagcacctcgcctat
gagaaatacaccgcctggaaacgtgagaccgtagcaggagcattcgccgcgcggggcctc
gatctggaagttgccgatccggtagcagttggacacggagcccgccgccgcgccgttttc
tcggcgagtcgcgatggacgcgaggttgcgctggggttccacgcggcaaactctcacgat
gtgatcgatctcacggaatgcctcgtggtggatccgggtatcgtccaggtgttgccggag
ctaaaggcgtttctcgcgccgttagtggccagtaagggcgaggcgcgtgtcacggtcatc
gcggcctctaacggcttcgatgtttctgttgacgtcgatggccttggcaccgaactccca
ccaggccaaagagcacgtctggcggcaggcgcggctgaactgaagcttctgcgctttagc
ttgaatggcgatccggtttatcagtctgccgtaccgttcgtcacaatgggcgcagcgcac
gttgttccaccgccgggtgttttcctgcaggcttctgctgacgccgaagctgccatggcg
agcctgatcgtcgaagcccttcctaagcgagcgaaacgcgcggtcgatcttttcagcggt
atgggcgcgttttcatttgcgctcgctgcccgggtcaaagtccttgcggtcgacagcgac
aagcgtgccatcgaggcgctggacgaggcccgccgtcacgcccaaggcattaagcccatc
gagaccaaggtccgtgatctcatgcgtgagccgctttcacgcaaggagctggaaggtttc
gacctcgccgttttcgatccgccgcgcgccggtgcccaggcgcaggccgagatgcttgcg
aagtccaaggtgcccgcggttgtcgcagtgtcgtgtaatccggcaaccttggctcgtgat
gcacgcatcctcatagatggcggataccgcgcgacccgcatcattccggtcgatcagttt
ctctactctccgcacgttgaggtcgtcgcggtgttcacgcgctag
DBGET
integrated database retrieval system
