Candidatus Filomicrobium marinum Y: BN1229_v1_1286
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Entry
BN1229_v1_1286 CDS
T03857
Symbol
mutM
Name
(GenBank) Formamidopyrimidine-DNA glycosylase
KO
K10563
formamidopyrimidine-DNA glycosylase [EC:
3.2.2.23
4.2.99.18
]
Organism
fiy
Candidatus Filomicrobium marinum Y
Pathway
fiy03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
fiy00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
BN1229_v1_1286 (mutM)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
fiy03400
]
BN1229_v1_1286 (mutM)
Enzymes [BR:
fiy01000
]
3. Hydrolases
3.2 Glycosylases
3.2.2 Hydrolysing N-glycosyl compounds
3.2.2.23 DNA-formamidopyrimidine glycosylase
BN1229_v1_1286 (mutM)
4. Lyases
4.2 Carbon-oxygen lyases
4.2.99 Other carbon-oxygen lyases
4.2.99.18 DNA-(apurinic or apyrimidinic site) lyase
BN1229_v1_1286 (mutM)
DNA repair and recombination proteins [BR:
fiy03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA glycosylases
BN1229_v1_1286 (mutM)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Fapy_DNA_glyco
H2TH
zf-FPG_IleRS
Motif
Other DBs
NCBI-ProteinID:
CPR17502
UniProt:
A0A0D6JCX3
LinkDB
All DBs
Position
1:1207991..1208881
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AA seq
296 aa
AA seq
DB search
MPELPEVETVRRGLEPELVGRRLVQVEQRRPDLRFPLPDRFAERLSGRRVEALRRRAKYL
IADLEGDESLVMHLGMSGRFTIVPGAMDGNGSRPGVFTHEVTPAAKHDHVVFHTDRGTTV
TYNDARRFGFMLLIEANALDTHALFAAMGPEPLSNALHAGHLAARATGRTTDLKAFLMDQ
RNVAGLGNIYVCEALYRAKLSPLRVASSLATKKAAPTARAERLVPAIVSVLNDAIAAGGS
SLRDYRQASGELGYFQHTFAVYGREGEPCSRTGCGGTVRRIVQAGRSTFYCPSCQR
NT seq
891 nt
NT seq
+upstream
nt +downstream
nt
ttgccggaattacccgaagttgaaaccgtaagacgcggcctggagccggagttggtgggg
aggcggctcgtgcaagtcgagcagcggcggccggatttgcgcttcccgcttcccgatagg
ttcgccgaacgcctatccggacgccgtgttgaggcgctacgccgtcgcgcgaaatatctg
atagcggatctggaaggtgatgaaagcctcgtcatgcatctcggcatgagcggcaggttt
accattgtacctggtgcaatggacggcaatggcagccgtcccggcgtttttactcatgag
gtaaccccagccgcgaaacacgatcatgtcgtcttccacaccgatcgcggaacaaccgtg
acctataacgacgcccgtcgcttcggcttcatgttgttgatcgaggcgaacgcgttggac
acgcatgcgctctttgccgcgatgggtcctgagccgttgagcaacgcgctgcatgctggc
cacctcgccgcccgcgccacgggccgcaccacggatctcaaggccttcctgatggatcag
cgcaacgttgcgggtcttggcaatatttacgtgtgcgaggcgttgtatcgcgcgaagttg
tcaccgttacgcgtcgcgtcgagcttggcgaccaagaaggccgctccaacggcgcgcgcc
gaacgcttggtcccggccatcgtgagtgttctcaatgatgccatagctgcgggcgggtcc
tcactgcgtgattaccggcaagcttctggagaactcggatatttccagcacacctttgcg
gtctatggccgcgaaggcgagccttgtagccggactggctgtggaggcaccgttcgccgt
atcgtccaggctgggcgctcgacattctattgcccatcctgccagcgctaa
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