Candidatus Filomicrobium marinum Y: BN1229_v1_1340
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Entry
BN1229_v1_1340 CDS
T03857
Symbol
lysA
Name
(GenBank) Diaminopimelate decarboxylase
KO
K01586
diaminopimelate decarboxylase [EC:
4.1.1.20
]
Organism
fiy
Candidatus Filomicrobium marinum Y
Pathway
fiy00300
Lysine biosynthesis
fiy00470
D-Amino acid metabolism
fiy01100
Metabolic pathways
fiy01110
Biosynthesis of secondary metabolites
fiy01120
Microbial metabolism in diverse environments
fiy01230
Biosynthesis of amino acids
Module
fiy_M00016
Lysine biosynthesis, succinyl-DAP pathway, aspartate => lysine
Brite
KEGG Orthology (KO) [BR:
fiy00001
]
09100 Metabolism
09105 Amino acid metabolism
00300 Lysine biosynthesis
BN1229_v1_1340 (lysA)
09106 Metabolism of other amino acids
00470 D-Amino acid metabolism
BN1229_v1_1340 (lysA)
Enzymes [BR:
fiy01000
]
4. Lyases
4.1 Carbon-carbon lyases
4.1.1 Carboxy-lyases
4.1.1.20 diaminopimelate decarboxylase
BN1229_v1_1340 (lysA)
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GFIT
Motif
Pfam:
Orn_Arg_deC_N
Orn_DAP_Arg_deC
Ala_racemase_N
Meth_synt_1
Motif
Other DBs
NCBI-ProteinID:
CPR17620
UniProt:
A0A0D6JDY8
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All DBs
Position
1:1267551..1268825
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AA seq
424 aa
AA seq
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MHHFAYRDGVLTAEGVSLVDIAEAVGTPFYCYSTATLTRHYEVLSQAFDGQNALICYAVK
ANSNQAVLATMARLGAGMDVVSEGELRRARAAGVPASKIIFAGVGKTRSEMAYALSEGIL
GFNVESEPELSALSDVAAEMGLRAPVAIRVNPDVDAGTHAKISTGKAENKFGVPFAAAPE
LYAKAAKLPGIEITGVHMHIGSQITDLAPFRAAFARMHELVVMLRAAGHNLRHLDIGGGL
GIPYRGTNDTPPHPDEYARVVREALGDLGLKVVLEPGRMIVGNAGVLVTRVIYVKEGSDK
TFTIVDGAMNDLIRPTLYEAYHDIWPVLEARAQNPAVMQDVVGPVCETGDFLAEDRKLPL
LQPDDLIAVMSAGAYGAVMSSTYNSRLLIPEVMVSGDAYAVIRSRPTYDDLIAMDTLPPW
LSKG
NT seq
1275 nt
NT seq
+upstream
nt +downstream
nt
atgcatcattttgcctatagggacggcgtcctcaccgccgaaggcgtcagcctcgtcgat
atcgcggaagccgttggcacgcctttctattgctattcgaccgcgacgttgacgcgccac
tacgaggttctgtcccaggcctttgatggtcagaacgcgttgatttgctacgcggtcaag
gcgaactccaaccaagctgtcctggccacgatggcgcgcctcggtgcgggcatggatgtc
gtgtctgaaggcgaattgcggcgggcgcgggcagcaggtgtccccgcaagtaaaatcatt
ttcgccggagtcggaaagacgcggtccgaaatggcctacgcgctctcggagggcattctc
gggttcaacgtcgaaagtgaaccggagttgtcggctctaagcgatgtcgctgcggaaatg
gggctgcgagcccccgtagcgatccgcgtaaacccggacgtagacgctggaactcacgct
aagatttctacgggcaaggccgagaacaaattcggcgtgccttttgctgcggcacccgaa
ctttacgccaaggccgcaaaactgccgggcatcgagatcaccggcgtacacatgcatatc
ggcagccagatcaccgatttagcgccatttcgagcggcgttcgcccgcatgcatgaactc
gtcgtcatgctgcgcgccgcggggcataatctgcgccacctggatattgggggcggtctc
ggaatcccctaccgcgggacgaacgatacaccaccccatcccgacgaatatgcgcgcgtc
gtgcgggaggctctcggagatcttggtctgaaggtcgttcttgagccgggacgaatgatt
gtcggcaacgctggtgtgctcgtaacgcgcgtaatctacgtcaaggaaggatctgacaag
accttcacgatcgtagatggcgcgatgaacgatttgatccggccgacgctttacgaggcg
tatcacgatatctggccggtccttgaagcgcgcgcccagaatcccgctgtcatgcaggat
gtcgttggcccggtatgcgaaaccggcgactttctggccgaagatcgcaaattaccgctc
ttgcagccggacgatctgatcgccgttatgagcgccggtgcgtacggtgccgtgatgtca
tcgacctacaactctagattgctgatccctgaggttatggtctcaggagatgcgtatgct
gtgatccggagccggccgacatatgatgacttgattgcgatggacacgcttccgccctgg
ctgtcgaaaggctga
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