Candidatus Filomicrobium marinum Y: BN1229_v1_1491
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Entry
BN1229_v1_1491 CDS
T03857
Name
(GenBank) putative peptidoglycan binding domain protein
KO
K21470
L,D-transpeptidase YcbB
Organism
fiy
Candidatus Filomicrobium marinum Y
Brite
KEGG Orthology (KO) [BR:
fiy00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
fiy01002
]
BN1229_v1_1491
01011 Peptidoglycan biosynthesis and degradation proteins [BR:
fiy01011
]
BN1229_v1_1491
Peptidases and inhibitors [BR:
fiy01002
]
Cysteine peptidases
Family C82
BN1229_v1_1491
Peptidoglycan biosynthesis and degradation proteins [BR:
fiy01011
]
Peptidoglycan biosynthesis and degradation
Transpeptidase
BN1229_v1_1491
BRITE hierarchy
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Paralog
Gene cluster
GFIT
Motif
Pfam:
YkuD
Scaffold
PG_binding_1
Motif
Other DBs
NCBI-ProteinID:
CPR17946
UniProt:
A0A0D6JDK1
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All DBs
Position
1:1423715..1425460
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AA seq
581 aa
AA seq
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MSKDEIAPNRPALLSLVLALGLTIWCGLVPFAVAAPEPTSPVPPQPVPATEVRQLPDGEI
TYPTPETFSEAVEALLRKEEGVPLPVRQRKDALLAYYVTEAAAPIWWRNPAMRDDLINAM
RHAEDEGLGVSDYPIEPLQQLPQRDRFTFAVAADLTHAASIELYYSAFFLKFASDIKVGR
FLPTKVDSKLYWQSKSIDRVAALRWIAELGSMQKFIEVWQPQVPGYAGLKRALKHYREIE
KAGGWPFVQHGEVLKPGMTAPQVTVLRARLGAVDPAVTAAPPGAETLYDDALLAAVKRFQ
ATHGLDPDGIVGKQTLFQLNIPVEQRIRQIKLSMERWRWMPENLGDHYVMVNIAGYELVH
IRNGQKQDRMRVVVGKPYHQTPVFSERMTYVEINPYWNVPHSIAVNEELPKLQSQPAAVA
GKGFEVMVGDTPTSVMSIDWKKYSASNFPFRLRQKPGNGNALGRVKFMFPNQFNVYMHDT
PARGLFSSADRARSHGCIRLARPLDMAEQVLAQAPGWSRQKIDEVVAKQDRTVVSLKQPL
DVHITYSTAWRDEDGAVHFRPDIYQRDAKLHLALFGKPSPY
NT seq
1746 nt
NT seq
+upstream
nt +downstream
nt
atgtcgaaggacgagattgctcccaataggccagcattgttgtcgttggtccttgctctc
ggtctgaccatatggtgcggtctggtcccattcgccgtcgctgcaccggagcccaccagt
ccagtaccgccccaacctgtgcccgcaacggaagtccggcaacttccagacggtgaaatc
acttacccaacccctgaaacattctctgaagcagtcgaagccctgctcagaaaggaagag
ggcgtacccttacctgtacgccagcgcaaagatgcgctgctagcctattatgtgactgaa
gctgcagctccaatttggtggcgcaatcctgcgatgcgggacgacctgattaatgcgatg
cgtcacgctgaggacgaggggttgggtgtttccgactaccccatagaaccgctccagcaa
ttaccgcagagggatcgctttacgttcgctgtcgcagctgatctcacccatgcagcgagc
attgagctctactattccgcgttcttcttgaagtttgcgtccgacatcaaagttggccgc
ttcttgccgacgaaagtagattcaaaactctattggcagagcaaatctattgatcgggtt
gccgccctgcgctggatagccgaactcggcagcatgcagaagttcatcgaagtctggcag
ccccaggtacccggatatgctggattgaagcgcgcgctgaaacactatcgcgagattgag
aaggctgggggatggccgttcgtgcagcatggagaggtgctgaaacccggcatgaccgct
cctcaagtcacggtactgcgcgcgcgtctcggcgccgtagatccggcggtgacagccgcc
ccgcccggcgcagaaaccctttacgacgacgctttactggcagcggtaaagcggttccag
gcgacgcacggcctcgaccctgacgggattgtgggcaagcagacgttgtttcagctcaac
atccctgttgaacagcgcatccgtcagataaagctgtcgatggagcggtggcgttggatg
cccgaaaatctcggcgaccactatgtgatggtcaacattgccggatacgaattagtccac
atacgcaacggtcaaaagcaggatcggatgcgggtcgtcgttggcaaaccttatcatcag
acgccggtcttcagtgagcgaatgacctacgtcgaaatcaatccatactggaatgtaccg
cactcaatcgcggtgaatgaggaactccccaaattacaaagtcagcccgccgccgttgcc
ggcaaaggcttcgaagtcatggtcggggacacacctacaagcgtcatgtccattgattgg
aagaagtatagcgccagcaattttccgtttcgcttgaggcaaaagccgggcaacggaaat
gcgttggggcgcgtcaaattcatgtttcccaaccagttcaacgtctacatgcatgacacc
ccggcgcgggggctcttttcctcggccgaccgtgcgcgcagccatggatgcatacggctc
gcgcgtcctttggatatggcagagcaagtcctcgctcaggcgccagggtggagccgccaa
aaaatcgacgaagtcgttgccaaacaggaccgcaccgtcgtcagtctaaagcagccactg
gatgtccacatcacgtactcgacggcatggcgcgatgaggatggggcagttcatttcagg
ccggacatctaccagcgcgacgctaagctccacctcgccctgtttggaaaaccatcgccg
tattga
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