Candidatus Filomicrobium marinum Y: BN1229_v1_1907
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Entry
BN1229_v1_1907 CDS
T03857
Symbol
yliG
Name
(GenBank) putative AdoMet-dependent methyltransferase, UPF0004 family
KO
K14441
ribosomal protein S12 methylthiotransferase [EC:
2.8.4.4
]
Organism
fiy
Candidatus Filomicrobium marinum Y
Brite
KEGG Orthology (KO) [BR:
fiy00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
fiy03009
]
BN1229_v1_1907 (yliG)
Enzymes [BR:
fiy01000
]
2. Transferases
2.8 Transferring sulfur-containing groups
2.8.4 Transferring alkylthio groups
2.8.4.4 [ribosomal protein uS12] (aspartate89-C3)-methylthiotransferase
BN1229_v1_1907 (yliG)
Ribosome biogenesis [BR:
fiy03009
]
Prokaryotic type
ribosomal protein modification factors
BN1229_v1_1907 (yliG)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Radical_SAM
TRAM_2
UPF0004
TRAM
YajR_YAM
CLP1_P
Motif
Other DBs
NCBI-ProteinID:
CPR18881
UniProt:
A0A0D6JEP2
LinkDB
All DBs
Position
1:1852699..1854066
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AA seq
455 aa
AA seq
DB search
MTTNEAPAAKTVAMPEKLANPPKVGFVSLGCPKALVDSERIITKLRSEGYAIAPNYEGAD
AVVVNTCGFLDSAKAESLEAIGEALNENGRVIVTGCLGNDADRIRSEYPDVLAITGPHQY
EAVVSAVHEAVPPLHDPYLDLVPPEGLRLTPRHYAYLKISEGCNNRCTFCIIPGIRGDLK
SRPASHVLTEAERLVAAGVKEILVISQDTSAYGLDIKYAESNLRGRPVKARFYDLCAELG
KLGAWVRLHYVYPYPHVDEVIPMMADGLILPYLDIPFQHASPSVLKAMRRPAHQEKTLER
IARWRDMCPDLALRSTFIVGFPGETEEDFSLLLDWVREARLARAGCFRYEPVAGAIANDL
PGAVPDEVKEERWHRFMAVQQEVSRKLLAKKVGKEIEVLIDEVDEEGALGRSKWDAPEID
GSVFLNGDTDVAAGDIVTARVAHADEYDLWAERTP
NT seq
1368 nt
NT seq
+upstream
nt +downstream
nt
atgacaacgaacgaggcgcctgccgctaaaactgtcgcgatgcctgaaaagctcgcaaac
ccaccgaaggttggttttgtgtcgttgggctgcccgaaggctctcgtcgactcagagcgt
atcatcacgaaactgcggtctgagggatatgccatcgcgccaaattatgaaggggccgat
gcagtggtggtcaacacctgcgggttccttgactcagctaaggctgaaagcctcgaggcc
atcggtgaagccttaaatgaaaatggccgcgtcatcgtaacaggctgccttgggaacgat
gcggatcgcattcgctcagagtaccccgatgtcctcgcaatcaccggccctcaccaatac
gaagctgtcgtttctgctgtgcacgaggcggtgccgccactgcatgatccctacctggat
cttgtgccgcctgagggattgcgcctgacgccgcgccactatgcttatttgaagatttcc
gagggctgcaacaaccgctgtacgttctgcatcattcccggcattcgaggcgatctaaag
agtagacccgcatcacatgtgctgaccgaagccgagcgtctcgttgccgctggggttaag
gagatcctggtaatcagccaggacacctcagcctatggtctggacatcaagtatgctgaa
agcaatttgagaggcaggcctgtcaaggcgcgtttttatgatctttgcgctgaactggga
aaattgggagcctgggtccggctgcactacgtctatccctatccgcatgtcgacgaggta
atcccgatgatggcggacggcttgattcttccgtatctcgacatccctttccagcatgcc
tccccatcggtgctcaaggccatgcgccgtcctgcacatcaagagaaaacgctcgagcgt
atcgcgcgctggcgagatatgtgcccagatctagcactacgctcgacgttcattgtcggc
ttccccggtgaaacggaagaagatttttcgctcctgctcgattgggtccgtgaagcacgc
ctcgcgcgtgcaggatgcttccggtatgagcctgtcgccggagccatcgccaatgatctg
cctggtgctgtgccggatgaagtcaaggaagaacgttggcaccgctttatggcggtccag
caggaagtatcccgaaaacttttggcaaagaaggtcggcaaagagatcgaagtcctgatc
gatgaagtggacgaggaaggcgcgctgggccgatcgaagtgggatgcgccagaaatcgac
ggaagtgtttttctcaacggtgatacggatgtagctgccggcgatatcgtaaccgcgcgt
gttgctcatgccgacgagtacgatttgtgggcggaacgtaccccctga
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