Candidatus Filomicrobium marinum Y: BN1229_v1_1938
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Entry
BN1229_v1_1938 CDS
T03857
Symbol
kdsB
Name
(GenBank) 3-deoxy-manno-octulosonate cytidylyltransferase
KO
K00979
3-deoxy-manno-octulosonate cytidylyltransferase (CMP-KDO synthetase) [EC:
2.7.7.38
]
Organism
fiy
Candidatus Filomicrobium marinum Y
Pathway
fiy00541
Biosynthesis of various nucleotide sugars
fiy01100
Metabolic pathways
fiy01250
Biosynthesis of nucleotide sugars
Brite
KEGG Orthology (KO) [BR:
fiy00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00541 Biosynthesis of various nucleotide sugars
BN1229_v1_1938 (kdsB)
09180 Brite Hierarchies
09181 Protein families: metabolism
01005 Lipopolysaccharide biosynthesis proteins [BR:
fiy01005
]
BN1229_v1_1938 (kdsB)
Enzymes [BR:
fiy01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.38 3-deoxy-manno-octulosonate cytidylyltransferase
BN1229_v1_1938 (kdsB)
Lipopolysaccharide biosynthesis proteins [BR:
fiy01005
]
Lipid A
BN1229_v1_1938 (kdsB)
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Gene cluster
GFIT
Motif
Pfam:
CTP_transf_3
NTP_transf_3
DUF2064
Motif
Other DBs
NCBI-ProteinID:
CPR18951
UniProt:
A0A0D6JFV8
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All DBs
Position
1:1885975..1886742
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AA seq
255 aa
AA seq
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MSTSTLIVIPARMQASRLPGKPMADIAGEPMIVHVWRRAHAAGLGRVVVATDSEEIRDAI
RSVGGEAVMTRADHASGSDRVYEAINKVDPDSEAEYIVNLQGDLPTLEPHLVDACIAPLR
SKGPHIVTLAAEISEEAERDNPNVVKVVATPVGSPNLLRALYFTRAVAPYGEGPFYHHIG
IYAYRRSALERFVALRPSPLEQRERLEQLRALEDGMRIDVAIVDTVPLGVDTPADLERAR
QLLNNRAADIAARGS
NT seq
768 nt
NT seq
+upstream
nt +downstream
nt
atgtccaccagcactttgatcgtaattccggctcgcatgcaggcctcgcggttgccaggc
aaaccgatggctgacatcgctggcgaacccatgatcgtccacgtctggcggcgggctcat
gccgcgggcctcgggcgcgttgttgttgccaccgacagcgaagagatacgcgacgcaatt
cgctcagtcggcggcgaagcggtcatgacgcgcgctgatcacgcatcaggttctgatcgg
gtgtatgaggcaatcaacaaggtcgatccggacagcgaagccgagtacatcgttaatttg
cagggcgatctgccaacgttggagccgcacctcgttgacgcgtgtatagcgccgttgcgc
agcaaggggccgcacatcgtgaccctggctgccgagatcagcgaggaggccgaacgcgac
aaccccaacgtcgttaaggtggtcgcaacgccggtcggatcacctaacttgctgcgagca
ctatattttacccgagcggtggctccctatggggagggtcctttctatcatcatattggt
atctacgcttatcgccgttcggcgctcgaacgttttgtggctctgcggccttcgccgtta
gagcagcgcgaacgcttggaacaattgcgagccctcgaagatggcatgcgcatagatgtc
gcgatcgttgacacggttccgctcggtgtcgatactcccgccgacttggaacgtgcacgc
cagcttttgaacaatcgtgcggccgatatcgcggcgcgtgggtcttaa
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