Candidatus Filomicrobium marinum Y: BN1229_v1_1944
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Entry
BN1229_v1_1944 CDS
T03857
Name
(GenBank) DNA polymerase III subunits gamma and tau
KO
K02343
DNA polymerase III subunit gamma/tau [EC:
2.7.7.7
]
Organism
fiy
Candidatus Filomicrobium marinum Y
Pathway
fiy03030
DNA replication
fiy03430
Mismatch repair
fiy03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
fiy00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
BN1229_v1_1944
03430 Mismatch repair
BN1229_v1_1944
03440 Homologous recombination
BN1229_v1_1944
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
fiy03032
]
BN1229_v1_1944
03400 DNA repair and recombination proteins [BR:
fiy03400
]
BN1229_v1_1944
Enzymes [BR:
fiy01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
BN1229_v1_1944
DNA replication proteins [BR:
fiy03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
BN1229_v1_1944
DNA repair and recombination proteins [BR:
fiy03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
BN1229_v1_1944
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol3_gamma3
DNA_pol3_delta2
DUF3646
DNAX_ATPase_lid
AAA
AAA_22
RuvB_N
AAA_5
AAA_16
NTPase_1
AAA_30
AAA_14
AAA_19
AAA_18
AAA_24
DUF815
TsaE
DNA_pol3_delta_C
AAA_assoc_2
SRP54
AAA_2
nSTAND3
Motif
Other DBs
NCBI-ProteinID:
CPR18965
UniProt:
A0A0D6JF63
LinkDB
All DBs
Position
1:1890729..1892627
Genome browser
AA seq
632 aa
AA seq
DB search
MTQKKTGIMASDGTPASETTTKPYVVLARKYRPQTFDDLIGQDAMVATLSNAFEQGRIAQ
GYMLTGVRGVGKTTTARIIARALNFEVDGVSKPTVRLPTDPAAFGRHCREIMESRHADVI
EMDAASNTGIDNVREIIESARYRPLVARYKVYIIDEVHMLSKAAFNALLKTLEEPPEHVK
FIFATTEIRKVPVTVLSRCQRFDLRRVDVPQLSQHFKKITKEEGASAEDEALMLIARAAG
GSVRDGLSILDQAIAFTNGEVKAADVRAMLGLADRGRIFDLLDLLFAGRAGDAINALSAL
HRDGAEPVQVLTDLSEAVHLATRIKAVGAEAARDALSAEEQRRAGSVAERLSVPLLSRAW
QMLLKGIEEVGRAPSPIAAAEMVLIRMAYTADLPGPEEVIKALGGESVPARRAAPAPATA
DTAAPRSQSDYGDRAPAIPSAATGDTDQGSVGEDPGFAGGGLDESWLESAEGFSDEFDTD
DPANASDLMPVSGGLRPDPGSFEEALDIIGQHRDLKLKVFLEEHVSLVKFDRATHSIELH
LLQGAPPTIANELRERLNQWTSHHWMVALSKSPGAPPVAVVRRERQAAELERLKAHPTVA
AALRAFPDAEIAAVRPIDGATDEDDDTGTRTG
NT seq
1899 nt
NT seq
+upstream
nt +downstream
nt
atgacgcaaaagaaaaccggcattatggcaagcgacggcactccagcatcggaaacgacg
accaaaccctacgtggtgttggcccgtaagtaccgtccgcagacgtttgacgacctgatt
gggcaggatgccatggtcgcgaccctgagcaatgcttttgagcagggccggatcgcgcaa
ggctatatgctgaccggtgtccgcggggttggtaagaccacgacggcgcgcatcatcgcc
cgggcgctcaacttcgaagttgacggcgtcagcaagccaacggtccggttaccgaccgac
cctgcggcgttcggccgccactgtcgggagattatggaaagccggcatgccgacgtcatt
gaaatggatgcggcgtcgaataccggcatcgacaacgtacgcgagatcattgaaagcgcc
cgttaccggccactggtcgcgcgctacaaagtctacatcatcgacgaagtccacatgctt
tcgaaggctgccttcaacgcgttgttgaagacgcttgaagaacccccggagcatgtgaag
ttcatcttcgcgacgaccgaaatccgcaaagtaccggttacagtgctctctcgttgtcag
cggttcgatctgcgccgcgtcgacgtaccccaactcagtcagcacttcaaaaagatcacc
aaggaagagggggcgagcgccgaagatgaggcgcttatgcttatcgctcgggctgcaggg
ggatcggttcgcgatggcctgtcgattctcgaccaggcgatagcgttcaccaacggtgag
gtgaaggcggccgacgtccgtgccatgttgggcttggcggaccgtggtcggatcttcgac
cttcttgatctgttattcgccgggcgcgctggagatgcgatcaacgcattatcggccttg
caccgcgatggggccgagcccgttcaggtgctcaccgatctctccgaggctgtgcatctg
gcgacgcggattaaagcggtgggcgcagaagccgcgcgcgatgccctttcggcggaagaa
caacggcgtgccggcagcgtggccgagcgactttcagtgccgcttttgtctcgcgcttgg
caaatgcttctcaagggcatcgaagaagtcggacgcgcgccaagcccgattgccgccgcc
gaaatggtgctgatccgaatggcttacaccgcggatctgcctgggcctgaggaggttatc
aaggcgctgggcggagagagcgtgccggcacgccgtgcagcaccggcgcccgcaacagcc
gatacagccgcgccgcggagccaatcagattatggcgatagagcacccgcgatcccctcg
gccgcgaccggcgacactgaccaagggtccgtgggcgaggacccaggtttcgcaggaggc
gggctcgatgagagctggctggagtctgccgaaggtttttccgacgagttcgataccgat
gatccggcaaatgcctcggacctgatgcccgttagcggcggattgcgtcccgatcccggc
tcgttcgaggaagctcttgatatcataggtcaacatcgtgatctgaagctcaaggttttc
ctggaagagcacgtcagtctcgtgaaattcgacagagccacgcacagcatcgagttacat
ctgctccagggtgcgccaccaacaatcgccaacgaattacgcgagcggctcaaccagtgg
accagtcatcactggatggtagcgctttcaaaatcgccgggcgctccacccgttgccgtg
gtgcggcgagaacggcaagctgcggaactcgaaaggcttaaagcacacccgaccgtagca
gcggcattgcgggccttccccgatgcggagatcgccgcagtccggccaattgacggtgcg
acggatgaagacgacgacacgggcacgcgcaccggttga
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