Candidatus Filomicrobium marinum Y: BN1229_v1_1961
Help
Entry
BN1229_v1_1961 CDS
T03857
Name
(GenBank) Polysaccharide biosynthesis protein CapD
KO
K24300
UDP-N-acetylglucosamine 4,6-dehydratase [EC:
4.2.1.135
]
Organism
fiy
Candidatus Filomicrobium marinum Y
Pathway
fiy00541
O-Antigen nucleotide sugar biosynthesis
fiy00552
Teichoic acid biosynthesis
fiy01100
Metabolic pathways
fiy01250
Biosynthesis of nucleotide sugars
Brite
KEGG Orthology (KO) [BR:
fiy00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00541 O-Antigen nucleotide sugar biosynthesis
BN1229_v1_1961
00552 Teichoic acid biosynthesis
BN1229_v1_1961
Enzymes [BR:
fiy01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.1 Hydro-lyases
4.2.1.135 UDP-N-acetylglucosamine 4,6-dehydratase (configuration-retaining)
BN1229_v1_1961
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Polysacc_synt_2
Epimerase
CoA_binding_3
GDP_Man_Dehyd
RmlD_sub_bind
NAD_binding_10
NAD_binding_4
3Beta_HSD
KR
Ldh_1_N
PglD_N
Motif
Other DBs
NCBI-ProteinID:
CPR19002
UniProt:
A0A0D6JEX5
LinkDB
All DBs
Position
1:1912188..1914191
Genome browser
AA seq
667 aa
AA seq
DB search
MADKGNEDARTAHVRKWLIELPRSAKRVVLVLSDFLLLTAVLWTAMSVRYQTFYVPDDWL
TAALFFLGPAITIGTFGSFGLYRLVTRFIGYRGMLRIFLCAALSMLIWAMAVFMLGQHGI
PRTVILVYGVLGALAVSASRQIAGLFLQSIGITIPKLPIDMNRKLVLIYGAGQMGVELLS
ALRRRVYDREPVGFIDDEPSMWGQYVGGLKVYRPEKVGFFIERRDIKEVLLAIPESQRGM
RRQIVQKLENYPVVVKIVPAIDEIASGKVGITDVRPLEVEDLLGREPVPPDAQLLTRVIR
DKSILVTGAGGSVGSELVRQILEQSPERLVLMDISEPALYEIELEIRETIAANPGQYEDT
ELVAVLGSVLDERLVRHTISSYDIQTIYHAAAYKHVPIVEQNIVAGISNNTFGCAVMADA
ARDLGVERFVLISTDKAVRPTNVMGATKRLAELVLQAHAMDEDVNTVFTMVRFGNVLDSS
GSVVRRFRQQIKQGGPLTVTHPDVIRYFMSIREAAELVIQAGSMATGGEVFVLDMGDPVK
IDDLARLMIRLAGLDPRSSENPGGDIEIVYTGLRPGEKLYEELLLGANTTGTEHPRIMRS
GEPWLPSNELWHELDGLKEAMKTRDLDAIRAVLMRTVEGYQPGPVLPPEADQDGEEKAWP
PLSRMLH
NT seq
2004 nt
NT seq
+upstream
nt +downstream
nt
ttggcggacaagggtaacgaggacgcgcgcacagctcacgtgcgcaagtggctcattgaa
ctgccacgctctgcaaagcgggtggttcttgtcttgagcgacttcctgctgttgaccgcc
gtcctctggaccgcgatgtcggtccgctaccagacattttacgttcccgatgattggctg
acagcggcgttgttcttcttggggccagccatcacgataggcacctttgggtccttcggg
ctttacaggcttgtgacgcgcttcatcggctatcgtggcatgctgcgcattttcttgtgt
gcagccctgtcgatgctgatttgggcaatggctgtatttatgctcggacagcacggcatc
ccacgcacggttatcctggtttatggcgtgttgggagcgcttgcggtaagtgcgagccgc
cagattgcgggtctgttcctgcaaagcattggcattaccattccaaaattgccaatcgat
atgaatcgcaagctcgtgctcatctatggcgcgggccaaatgggcgtcgagctgctgtct
gcgctgcgccgcagggtttacgaccgcgagcccgtcggtttcatcgacgacgagccgtcc
atgtggggtcagtacgtcggtgggctcaaagtctatcggccggagaaggtgggcttcttc
attgaacgccgcgacatcaaggaagtgctgttggcaattcctgaatcgcagcgcggcatg
cgccgacagattgtccagaagctggaaaactaccccgttgtggtcaagatcgtgcctgcg
atcgatgagatagcgtctggcaaagtcggcattacggatgtccgccctctggaggtcgaa
gatctcttaggccgtgaacccgtaccaccggatgctcaattgttgacgcgcgtcattcgc
gacaaatcaattctggtaacgggggctggtgggtcggtcgggtcggaattggtccggcaa
attctcgagcagtcgccggagcgcttggtgctcatggatatttcggaaccggccctctac
gagattgagctcgaaattcgagagacgatcgcagctaacccgggtcaatacgaggataca
gaactggtcgcggtgctgggctccgtgctcgatgaacggctcgttcgccacacgatatca
agctacgatatccagacaatctaccatgcagcggcctataagcacgtgcctatcgtggag
caaaatattgttgctgggatcagcaacaacacgttcggatgcgccgttatggctgatgcc
gcacgggatttgggcgttgaacgcttcgtgctgatctcgaccgataaggcggttcgtccg
acgaatgttatgggagctaccaagcgccttgctgagcttgtcctgcaggcgcatgccatg
gacgaggacgtcaacaccgtctttacgatggttcgcttcggaaatgtgctcgacagttct
ggatcggtcgttcgcaggttccggcaacagatcaagcagggcggaccgctgacggtgacc
caccccgatgtcatccgctatttcatgtcgatcagagaagcggccgaactggtcatccag
gcagggtccatggcgacgggcggggaagtcttcgttctggatatgggagaccccgtcaag
atcgacgaccttgcacgccttatgatccgcctcgcgggtctcgatccgaggagtagcgaa
aaccctggtggcgatatcgagatcgtctacaccggcctgcgcccgggcgagaaactctac
gaagaactcttgctcggcgccaatacgaccgggacggaacatcctcgcattatgcgttcc
ggagagccctggttgccatcgaacgagctctggcatgagctggatggtttgaaggaagcc
atgaagacgcgggatctcgatgccatccgcgcagtgttgatgcgcacggtagaaggatat
cagcccgggcccgtgcttccccctgaagccgatcaggacggcgaggagaaggcctggccg
cctttgtctcgtatgctgcattga
DBGET
integrated database retrieval system
