Candidatus Filomicrobium marinum Y: BN1229_v1_2077
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Entry
BN1229_v1_2077 CDS
T03857
Name
(GenBank) TRAP transporter, DctM subunit
KO
K11690
TRAP-type transport system large permease protein
Organism
fiy
Candidatus Filomicrobium marinum Y
Pathway
fiy02020
Two-component system
Brite
KEGG Orthology (KO) [BR:
fiy00001
]
09130 Environmental Information Processing
09132 Signal transduction
02020 Two-component system
BN1229_v1_2077
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
fiy02000
]
BN1229_v1_2077
Transporters [BR:
fiy02000
]
Other transporters
Electrochemical potential-driven transporters [TC:
2
]
BN1229_v1_2077
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DctM
Motif
Other DBs
NCBI-ProteinID:
CPR19253
UniProt:
A0A0D6JF54
LinkDB
All DBs
Position
1:complement(2021058..2022344)
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AA seq
428 aa
AA seq
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MDLIDWAGYISIALLFLMMLLAVPIFVSMGLAAFAAALLIDDFQLVARTFIQTVWQGASI
FELVALPLFILTGTIMQQTDAGRDLFAVTKAWAGSISNSLGVATIVACGIFAAISGSSIA
TAATVGLVAIPLLLEEGYGKTRAGGFVAGGGTLGIVIPPSIPLILYGVLTETSIGQLFIA
GVVPGIIMLTAFTLVVYFSRPQIKGTQDVSWSECLSLTLRCSGVLALPIIIIVAIYTGIF
TPTEVGALSVIYLLILGLAQQRLTFGKFVAALRTATATTGMLFMLIVFGQYFAHFLTFEQ
VPQSIAHAITDNATGVWAITLMILAYLVLGTFLESAAMLLISIPIFAPVAAAAGMDPLVF
GIFAVIAMEIAQISPPVGVNLFTIHGISGIGLWTLARGVIPFILIQICMLYIVYFFPEIV
LWLPHSMK
NT seq
1287 nt
NT seq
+upstream
nt +downstream
nt
atggatcttatcgactgggcgggttacatctcgatcgcccttctcttcctcatgatgctc
ctggctgtgcccatctttgtttcgatgggcctcgcggcctttgctgcagcactactcatc
gatgacttccagcttgtggcgcggacgttcatccagaccgtgtggcagggcgcttcaatt
ttcgaactggttgcgttgcccctgttcatcctcacgggcacgatcatgcagcaaacggat
gccgggcgagacttgtttgccgtgaccaaagcatgggccggctcgatctcgaactcgctc
ggcgtcgcaacgatcgtcgcttgcggtatctttgctgcgatttccggttccagtatcgca
acagccgcgacggttggcttggtcgctatcccgcttctgctcgaagaaggctacgggaaa
acccgtgcgggcggttttgtggctggcgggggaacgctcggcattgtgattccgccgtcg
atcccgctcatcctctacggcgtactaaccgaaacttctatcggtcagttgttcattgcg
ggcgtggttcccgggatcatcatgctcacggcatttacgctcgtggtctacttctcccgc
ccccagatcaaaggaacgcaggacgtttcatggagcgaatgtctttcattgacgttgcgt
tgcagcggtgtcttggcactgcccatcattattatcgtcgcaatttatactggcatcttc
acgccgacagaggtcggcgcgctctcggtaatctacttgttgatccttggtctcgctcag
caacgactaacgtttggcaagttcgtcgctgcgttgcgtaccgccacagcaacgacaggc
atgttgttcatgctcatcgtttttggtcagtacttcgcgcacttcctgacgttcgagcag
gtgccacagtcgatcgctcacgcgattaccgataacgccactggcgtttgggcgatcacg
ctgatgatcctagcctatctggtactcggtacgtttttggagagcgcggcaatgctgctc
atctccattccgattttcgcacctgtcgctgcagcagccggcatggatccgctcgtattc
ggtatctttgccgtcatcgccatggagatcgcgcagatatcgcctcctgtcggcgtcaat
cttttcaccatccatggcatctcgggaataggtctctggacgcttgcacgcggggtgatc
cctttcatcctcattcagatctgcatgctgtacatcgtctacttcttccccgagatcgtc
ctttggctcccccactccatgaaatga
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