Candidatus Filomicrobium marinum Y: BN1229_v1_2185
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Entry
BN1229_v1_2185 CDS
T03857
Symbol
pdhL
Name
(GenBank) Dihydrolipoamide dehydrogenase (E3) component ofpyruvate dehydrogenase
KO
K00382
dihydrolipoyl dehydrogenase [EC:
1.8.1.4
]
Organism
fiy
Candidatus Filomicrobium marinum Y
Pathway
fiy00010
Glycolysis / Gluconeogenesis
fiy00020
Citrate cycle (TCA cycle)
fiy00260
Glycine, serine and threonine metabolism
fiy00280
Valine, leucine and isoleucine degradation
fiy00310
Lysine degradation
fiy00380
Tryptophan metabolism
fiy00620
Pyruvate metabolism
fiy00630
Glyoxylate and dicarboxylate metabolism
fiy00640
Propanoate metabolism
fiy00670
One carbon pool by folate
fiy00785
Lipoic acid metabolism
fiy01100
Metabolic pathways
fiy01110
Biosynthesis of secondary metabolites
fiy01120
Microbial metabolism in diverse environments
fiy01200
Carbon metabolism
fiy01210
2-Oxocarboxylic acid metabolism
fiy01240
Biosynthesis of cofactors
Module
fiy_M00009
Citrate cycle (TCA cycle, Krebs cycle)
fiy_M00011
Citrate cycle, second carbon oxidation, 2-oxoglutarate => oxaloacetate
fiy_M00307
Pyruvate oxidation, pyruvate => acetyl-CoA
fiy_M00621
Glycine cleavage system
Brite
KEGG Orthology (KO) [BR:
fiy00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00010 Glycolysis / Gluconeogenesis
BN1229_v1_2185 (pdhL)
00020 Citrate cycle (TCA cycle)
BN1229_v1_2185 (pdhL)
00620 Pyruvate metabolism
BN1229_v1_2185 (pdhL)
00630 Glyoxylate and dicarboxylate metabolism
BN1229_v1_2185 (pdhL)
00640 Propanoate metabolism
BN1229_v1_2185 (pdhL)
09105 Amino acid metabolism
00260 Glycine, serine and threonine metabolism
BN1229_v1_2185 (pdhL)
00280 Valine, leucine and isoleucine degradation
BN1229_v1_2185 (pdhL)
00310 Lysine degradation
BN1229_v1_2185 (pdhL)
00380 Tryptophan metabolism
BN1229_v1_2185 (pdhL)
09108 Metabolism of cofactors and vitamins
00785 Lipoic acid metabolism
BN1229_v1_2185 (pdhL)
00670 One carbon pool by folate
BN1229_v1_2185 (pdhL)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
fiy04147
]
BN1229_v1_2185 (pdhL)
Enzymes [BR:
fiy01000
]
1. Oxidoreductases
1.8 Acting on a sulfur group of donors
1.8.1 With NAD+ or NADP+ as acceptor
1.8.1.4 dihydrolipoyl dehydrogenase
BN1229_v1_2185 (pdhL)
Exosome [BR:
fiy04147
]
Exosomal proteins
Exosomal proteins of breast cancer cells
BN1229_v1_2185 (pdhL)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Pyr_redox_2
Pyr_redox_dim
Biotin_lipoyl
Pyr_redox
FAD_oxidored
Biotin_lipoyl_2
GIDA
NAD_binding_8
AlaDh_PNT_C
Pyr_redox_3
PYNP_C
GCV_H
FAD_binding_2
Thi4
HlyD_3
HlyD_D23
FAD_binding_3
HI0933_like
Motif
Other DBs
NCBI-ProteinID:
CPR19478
UniProt:
A0A0D6JGA1
LinkDB
All DBs
Position
1:2116803..2118590
Genome browser
AA seq
595 aa
AA seq
DB search
MAKETVKEVRIPDIGDFSDVPVIEILVKPGDTVQPEDPLIVLESDKATMDIPAPEAGTVA
EVKVAVGDKVSKGSVILTLNASGEAAEAKPAKEAGTPEKASTAASPEATTPAPAAATSEY
AGKADVTCQMVVLGSGPGGYSAAFRAADLGMETVLIERWPVLGGVCLNVGCIPSKALLHT
TAVMEEAQALSAHGIKFAAPKIDLQVLREHKDKVVSKLTTGLGGMAKARKVTVVTGSGRF
LDPYHIEVALSDGSGTKIVKFEKAIIAAGSEAVKLPFLPEDPRIVDSTGALELRKIPKKM
LVIGGGIIGLEMATVYSALGARLECVEMLDGLMLGADRDLVKVWEKKNAHRFDAIMLETK
TVSAAAKKDGIHVTFEGKNAPKDPQVYDMVLVAVGRSPNGKRIDADKAGVSVDERGFIAA
NKQMQTNVAHIYAIGDIAGGPMLAHKAVHEGHVAAESAAGKPSYFDARQIPAVAYTDPEI
AWAGLTEAEAKQKGIKFTKAVFPWAASGRAIANGRDEGFTKLMFDVDDHRIIGGGIVGTH
AGDLISEVALAVEMGADAVDIAKTIHPHPTLSESIGMAAEVFEGTCTDLPPARKR
NT seq
1788 nt
NT seq
+upstream
nt +downstream
nt
atggctaaagagaccgtcaaagaagttcgtattcccgatatcggcgactttagcgatgtt
cccgttatcgaaatcctggtgaagcccggcgacacggttcagccggaagatccgctcatc
gtcctggaaagcgacaaggcgacgatggatatcccggctccagaagccggcaccgttgcc
gaggtcaaggtggccgtcggcgacaaggtgagcaaaggctcagtaatcctgacgctgaat
gcgtccggagaagcagccgaagcaaagccggcaaaggaagcaggtactcccgaaaaagca
tcgaccgctgcgagccctgaagccacaactccggcaccagccgctgcaacatctgaatat
gcgggcaaagccgacgtcacctgccaaatggttgtgctcggttctggaccaggggggtac
tcggcggctttccgcgcagccgatcttgggatggaaacggttctgattgaacgctggccg
gttctggggggcgtttgcctcaacgtcgggtgcattccctccaaggcgctgctacacacg
accgccgtgatggaggaggcccaagccctcagtgcacacgggatcaaattcgccgcgccc
aagatcgacctacaggttctgcgggaacacaaagataaggtcgtctctaaactgacgacc
ggcctcggcggcatggctaaggcacgtaaagtcacggttgtgacgggaagtggtcgcttc
cttgatccgtatcacattgaagtcgctttgagtgatggatcgggcaccaagatcgtaaag
tttgaaaaggcgatcatcgcggcgggttcggaagcggtaaagctgcccttcctccccgag
gatccgcgtatcgtcgattccaccggcgctcttgaactccgcaagatccccaaaaagatg
ctggtgatcggcggtggcattattggccttgagatggcgacggtctattccgcgctgggc
gcgcgcctggaatgcgttgagatgctcgacgggctgatgcttggcgctgaccgcgatctg
gtcaaggtgtgggaaaagaagaacgcccatcggttcgatgccattatgcttgagacaaaa
acggtgtctgccgccgccaagaaggacggaatccacgtcacctttgaaggcaagaacgcg
ccaaaggatccgcaggtctatgacatggtgcttgtcgccgtgggccgcagtccgaacgga
aaacgcatcgatgccgacaaggctggcgtctctgtcgatgagcgcggctttatcgcggcc
aacaagcagatgcagactaatgtcgcgcatatatatgccattggcgatattgccggggga
ccgatgctggcccataaggctgtccacgaaggccacgtggccgccgagtcagcagcaggc
aagccgagttatttcgatgcgcgtcagatacccgccgtcgcctacaccgatccagaaatc
gcctgggcggggctcacggaggccgaagcaaagcagaaggggatcaagttcaccaaggcg
gtattcccctgggcagcttcgggccgcgccatcgcgaacggacgcgatgaaggttttaca
aagctgatgttcgatgtagatgaccaccggattattggtggaggcatcgttggcacccat
gccggtgatctgattagcgaggtcgctttggcagttgaaatgggcgctgatgctgtcgac
atcgcaaaaacgattcatccccacccgacgctttccgagtccattggtatggctgcggag
gtcttcgaggggacttgtaccgatctacctccggcgcgaaagcgctga
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