Candidatus Filomicrobium marinum Y: BN1229_v1_2397
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Entry
BN1229_v1_2397 CDS
T03857
Symbol
yjgR
Name
(GenBank) putative ATPase
KO
K06915
DNA double-strand break repair helicase HerA and related ATPase
Organism
fiy
Candidatus Filomicrobium marinum Y
Brite
KEGG Orthology (KO) [BR:
fiy00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
fiy03400
]
BN1229_v1_2397 (yjgR)
DNA repair and recombination proteins [BR:
fiy03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
Archaeal homologous recombinant proteins
BN1229_v1_2397 (yjgR)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HerA_C
DUF87
FtsK_SpoIIIE
AAA_22
AAA_10
ResIII
AAA_16
AAA_30
TrwB_AAD_bind
T2SSE
nSTAND3
AAA_7
AAA_19
CbiA
AAA_28
Motif
Other DBs
NCBI-ProteinID:
CPR19964
UniProt:
A0A0D6JG45
LinkDB
All DBs
Position
1:2333951..2335441
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AA seq
496 aa
AA seq
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MSQSVLQDGKIYLGTSVKPEYLDLKLANRHGLITGATGTGKTVTLQVLAEGFSKNGVPVF
AADIKGDLSGIAKAGEPKDFIVKRNEKIGLTEYQNQAYPTVFWDVFGKSGHPIRTTILDM
GPLLLSRMLELNEVQEGVLNVAFRVAEEEKLPLLDLKDLRAQIHNIGERGKELSMKYGNV
ATASIGAIQRRLLVLEEQGADQFFGEPALDINDFMRVSMDGRGIVNLLAADQLMQKPRLY
GTFLLWMLTKLWQTLPEVGDQPKPKLVFFFDEAHLLFDEAPKPLLQRIEQVARLIRSKGV
GVYFITQNPLDVPDSVSSQLGNRIQHQLRAFTPKEQRAVKTAAETFRPNPDIDTERTILD
LGIGEALVSMLENKGEPSMVQRTLIRPPEGQIGPLTDEERATLMKRSPVDGKYDEAVDRE
SAHEILAKRAEELAAKEAELQKQANSGGTGSWLGNVIFGRGPRGGKSLGEQAVSYASKSI
MRRLVNTLVRSIMRGR
NT seq
1491 nt
NT seq
+upstream
nt +downstream
nt
atgagccaatcggttctccaggatggcaagatctatctcggaaccagcgttaagcccgag
tatctcgatctcaaattggcgaaccgccacggcttgattactggagcgacgggtaccggt
aaaacggtgaccttgcaggtgttggccgaaggcttctccaagaatggcgtccctgttttc
gctgccgatatcaagggcgacttatctggcatagcaaaagccggtgagccgaaggatttc
attgtcaaacgcaatgaaaagatcggcctgacggaataccagaatcaagcctatcccacc
gttttttgggatgtcttcggcaaatcggggcatccgatccgcacgaccatcctagacatg
gggccgctgcttctctcgcgcatgctggaactcaatgaagtccaggaaggcgtcctcaat
gtcgcgttccgtgtcgctgaagaagagaaacttcctctgctcgatctgaaagatttgcgc
gcgcagatacacaacatcggcgagcgcggcaaagagctctcgatgaagtacgggaacgtt
gcgaccgcatcgatcggtgcgatccagaggcgtctgctggttttggaggagcaaggggcc
gaccaatttttcggcgaaccggcgctcgatataaacgacttcatgcgcgtcagcatggat
ggtcgcggtatagtgaatttgctggctgcagatcagctcatgcaaaagccccggctttac
ggcacgttcctgctgtggatgctgacgaaactctggcagacgctgccggaagttggcgat
cagccgaagcccaagctggttttctttttcgacgaagcgcatctgctgtttgatgaagct
ccaaaaccccttctccagcgcattgagcaagtcgcgcgtctcattcgttcgaagggcgtc
ggcgtttacttcattacgcaaaacccgctcgacgtccctgacagcgtttcttcgcagctc
ggcaaccgcattcagcatcagttgcgcgcgttcactcctaaggaacagcgggcagtcaag
acagcggcagaaaccttcaggccaaacccggacatcgataccgagcgcacgatccttgat
ctcggcatcggtgaagcgctcgtttcgatgcttgaaaataagggcgaaccgtcaatggtg
cagcggacattgatccgtccgccggaaggtcagattggcccactcacagacgaggaacgc
gcaacgctcatgaagcgtagtcccgtcgacggcaaatatgatgaggcggttgatcgcgaa
agcgcccatgagatcttggcgaagcgtgctgaagagctcgcggccaaggaggctgaactg
caaaaacaggcgaactccggaggcacaggcagctggctggggaacgtcattttcggtcgc
ggcccacgcggtggtaagtcgcttggtgaacaagccgtcagctatgcaagcaagtcgatc
atgcgtcggctcgtaaatacgctggtgcgctcgatcatgcgagggcgctga
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integrated database retrieval system
