Candidatus Filomicrobium marinum Y: BN1229_v1_2494
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Entry
BN1229_v1_2494 CDS
T03857
Name
(GenBank) putative DNA repair protein HYPDE_32338
KO
K10979
DNA end-binding protein Ku
Organism
fiy
Candidatus Filomicrobium marinum Y
Pathway
fiy03450
Non-homologous end-joining
Brite
KEGG Orthology (KO) [BR:
fiy00001
]
09120 Genetic Information Processing
09124 Replication and repair
03450 Non-homologous end-joining
BN1229_v1_2494
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
fiy03400
]
BN1229_v1_2494
DNA repair and recombination proteins [BR:
fiy03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
Two-component NHEJ DNA repair complex
BN1229_v1_2494
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Ku
Motif
Other DBs
NCBI-ProteinID:
CPR20185
UniProt:
A0A0D6JGN4
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All DBs
Position
1:complement(2427117..2428064)
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AA seq
315 aa
AA seq
DB search
MVAVRTFWKGHMRLALVTIPIRLVSAISSEEKISFHQVDRKTKQRIRYKKVAGEGGREVP
SQDISYGYEVEPGNYVLFDNDELDALKLSSRHTIELTEFVDAFSINPLYFDRPYYILPDG
EVAEEGYCVIRDALQSAKKCGIGQIAMRGKENLIALMPAGNGLMLETLRYDSDVRDADDI
FSGLGTQKFRPGLIDMAKQLIEERSTEFDPSAYKDHYAETVREFVKEKLAGGETVAVSSG
EEAATGAGTVIDFMEALKRSVEKAPAKKGGRSEPKRAAAASTKRDPVKRSKAPEKSAGRG
SSGSKGRSATTKKKA
NT seq
948 nt
NT seq
+upstream
nt +downstream
nt
atggttgcggtccgcacattttggaaagggcacatgcgccttgcgctggtgaccatcccc
atcaggctggtcagcgcgatatcgtccgaagaaaagatatcattccatcaagtggaccgc
aaaacgaagcagcggatccgatacaaaaaggtagccggagagggtgggcgcgaagtcccc
tcacaggacatctcctacggttatgaagtcgagcccggcaactatgtgttgtttgacaac
gacgagcttgacgcgctgaagctttcctcgcgccatacgatcgagttgacggagttcgtg
gacgcgttctcgatcaatccgctctatttcgaccggccttattatatccttccggacggc
gaggtggcggaagagggttattgcgtaattcgcgacgcgcttcagagcgcaaaaaaatgc
ggaattgggcagatcgccatgcgcggcaaggaaaaccttatcgctctcatgccggccgga
aacgggctcatgctcgagacccttcgttatgacagcgatgtgcgcgacgcggatgacatc
ttttccggactcggaacgcagaaatttcggcctggcctgattgatatggcgaagcagctc
attgaagagcggtcgaccgagtttgatcccagcgcctacaaagatcattacgccgaaacg
gttcgagagttcgtcaaagaaaagctcgctggcggcgaaacggttgcggtcagtagtggc
gaagaagcggccaccggtgcgggtaccgtcatcgacttcatggaggcactcaagcgctcg
gtcgagaaggctcctgccaaaaagggcggtcggtcagagccgaaacgcgcggcggcagcc
tcgacaaagcgcgatcccgtaaagcgatccaaagcacctgagaaatcagctggccgaggc
tcttccggctcaaagggccgatccgcaacgacgaagaaaaaagcgtga
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integrated database retrieval system
