KEGG   Candidatus Filomicrobium marinum Y: BN1229_v1_2567
Entry
BN1229_v1_2567    CDS       T03857                                 
Symbol
nrdJ
Name
(GenBank) Vitamin B12-dependent ribonucleotide reductase
  KO
K00525  ribonucleoside-diphosphate reductase alpha chain [EC:1.17.4.1]
Organism
fiy  Candidatus Filomicrobium marinum Y
Pathway
fiy00230  Purine metabolism
fiy00240  Pyrimidine metabolism
fiy01100  Metabolic pathways
fiy01232  Nucleotide metabolism
Brite
KEGG Orthology (KO) [BR:fiy00001]
 09100 Metabolism
  09104 Nucleotide metabolism
   00230 Purine metabolism
    BN1229_v1_2567 (nrdJ)
   00240 Pyrimidine metabolism
    BN1229_v1_2567 (nrdJ)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:fiy03400]
    BN1229_v1_2567 (nrdJ)
Enzymes [BR:fiy01000]
 1. Oxidoreductases
  1.17  Acting on CH or CH2 groups
   1.17.4  With a disulfide as acceptor
    1.17.4.1  ribonucleoside-diphosphate reductase
     BN1229_v1_2567 (nrdJ)
DNA repair and recombination proteins [BR:fiy03400]
 Prokaryotic type
  Other factors with a suspected DNA repair function
   Modulation of nucleotide pools
    BN1229_v1_2567 (nrdJ)
SSDB
Motif
Pfam: Ribonuc_red_lgC Ribonuc_red_2_N TSCPD TACO1_YebC_N
Other DBs
NCBI-ProteinID: CPR20340
UniProt: A0A0D6JGK5
LinkDB
Position
1:complement(2492516..2496196)
AA seq 1226 aa
MKITRRFTKAGTSPYANIPFRSATSEIKNPDGSIVFSLENFDVPEHWSQVAADILAQKYF
RKAGVPARLKRVEETQVPSWLWRSVADADALAELPEDDRIIGETDSRQVFDRLAGTWTYW
GWKGDYFSSEEDARAFFDEHCYMLAMQMGAPNSPQWFNTGLHWAYGIDGPGQGHYYVDHV
TGELTASASAYEHPQPHACFIQSVEDDLVNENGIMDLWVREARLFKYGSGTGTNFSSLRS
ANEKLSGGGRSSGLMSFLKIGDRAAGAIKSGGTTRRAAKMVVVDVDHPDIEEYINWKVKE
EQKVAALVTGSKICEKRLKAILKACINCEADGEDCFDPAKNPALKRAIKEARREFVPDNY
IRRVIQFARQGFKDLNFATYDTDWDSEAYLTVSGQNSNNSVRVSDDFLRAVEAGSDWNLV
SRIDRKPVKTINARDLWEQIGHAAWASADPGIQFHTTINDWHTCPNSGEIRASNPCSEYM
FLDDTACNLASLNLMTFRDADGNFDTEMFEHACRLWTIVLEISVTMAQFPSRRIAELSYR
YRTLGLGFANIGGLLMASGISYDSAQGRAICGAISAIMTGTSYATSAEMAGEIGAFPGYE
ANASEMLRVIRNHWRAAHGEAGGYEELSTLPVPLDHNACEDKRLVDAAMRAWDKAIELGN
QNGFRNAQATVIAPTGTIGLVMDCDTTGIEPDFALVKFKKLAGGGYFKIINQAVPGALRK
LGYSQAQIAEIEAYAVGHASLAQAPNINHTSLKTKGFDDAAISRIEAGLESAFDIKFVFN
KWTLGEEFLTGKLGVPAESLVDPKFDLLSHLGFTAKEIEAANDHVCGAMTLEGAPHLKAE
HLPIFDCANPCGRTGKRYLSVNSHIDMMAAAQPFISGAISKTINMPNDATVEDCKQAYTR
SWRLALKANALYRDGSKLSQPLNSQLLGETAEEQDEAVEQLSSERPQALRAAAAAEKIVE
RLVPRGRERLPGRRKGYTQKATVGGHKVYLTTGEYEDGRIGEIFIDMHKEGAAFRSLMNN
FAIAISLGLQYGVPLDEYVDAFTFTRFEPAGLVQGNETIKNATSVLDYLFRELAVSYLGR
NDLAHADPGEISATALGGKEAESETPSVPAAQIVSHGFTRGALVGRIGPRDSSTVQLAPS
DVTTAYSGSGVNDGGTQLFARQTIETSRVVTEGALALKPDLVSDRITEARIKGYEGEACG
SCGNFTLVRNGTCLKCNTCGGTSGCS
NT seq 3681 nt   +upstreamnt  +downstreamnt
atgaagatcacacggcgcttcaccaaagccggcacttcgccttacgccaacatccccttc
cgcagcgccacctccgagatcaagaacccagacggctcgatcgttttcagcctcgaaaac
ttcgatgttccggaacattggagtcaggttgccgctgacattcttgcgcagaagtatttc
cgcaaggccggcgttcccgcacgcctgaaaagggttgaggaaacccaggtcccgtcctgg
ctgtggcgctcggtggctgacgctgacgctctggctgagctcccagaagatgaccggatc
atcggcgaaaccgactctcgccaggtctttgaccggctcgccggtacctggacctactgg
ggctggaagggcgactacttcagcagcgaggaagatgcgcgcgcattcttcgatgagcat
tgctacatgctggccatgcagatgggcgcgccgaacagcccgcagtggttcaacactgga
ttgcactgggcctacggcatcgatggccccggccagggtcactattatgtcgaccatgtt
acgggcgagctgactgcttcagcttccgcttacgagcacccgcagccgcatgcttgcttc
atccagtcggtcgaggacgatctcgtcaacgagaacggcatcatggacctgtgggtgcgt
gaagcgcgcctcttcaaatatgggtccggcaccggcaccaacttctcgagcctgcgctcc
gcaaatgaaaaactgtcaggcggcggtcgctcgtcgggtctgatgagcttcctgaaaatc
ggcgatcgtgctgccggtgctatcaagtccggcgggacgacacggcgtgcggcgaagatg
gtcgttgtcgatgtcgatcacccggatatcgaggaatacatcaactggaaggtcaaggaa
gagcagaaggtcgccgctctggtgaccggctccaagatctgcgagaagcgcctcaaggcc
atcctcaaggcatgcatcaattgcgaggccgacggtgaggactgcttcgatccggcgaag
aatcctgcgctgaaacgagcgatcaaagaggctcgccgtgagttcgtgccggacaactat
atccgtcgcgttatccagttcgcgcgtcagggtttcaaggatctcaactttgcgacctac
gataccgactgggattcggaggcttatctgaccgtctctggccagaactccaacaactcc
gttcgagttagcgacgacttcctgcgtgctgtcgaagcgggttcggattggaacctcgtg
tcgcgtatcgaccgcaagccggtgaagactattaatgcgcgtgatctgtgggaacagatt
ggtcatgccgcttgggcatcagccgatcccggtatccagttccatacgacgatcaacgac
tggcacacatgcccgaacagcggtgagatccgcgcctctaatccgtgctcggaatacatg
ttcctggacgacacggcgtgcaatctggcgtcgctcaacctgatgaccttccgggatgcg
gatggcaacttcgatacagaaatgttcgagcacgcctgccggctgtggacgatcgtgctg
gaaatttcggtcacgatggcccagttcccgtctcgtcgcattgcggaattgagctatcgt
taccgtactctgggcctgggctttgccaacatcggcggcctgttgatggcttcgggtatt
tcctatgactccgcacaggggcgagccatctgcggtgcgatctccgctatcatgaccgga
acctcctacgcgaccagcgccgagatggctggcgagattggagctttcccgggttacgaa
gccaacgcgtccgagatgcttcgggtcatccggaaccattggcgtgcggcacacggcgaa
gctggcggttacgaagaactctcgacgctgccggtgcccctcgaccacaatgcatgcgaa
gacaagcgtctcgtcgacgcggctatgcgggcttgggacaaagccatcgaactgggcaac
cagaatggtttccgcaacgcgcaggccacggtgattgcgccgacgggcacaatcggcctt
gttatggattgtgatacgacgggtatcgagccggacttcgcgttggtgaagttcaagaag
cttgccggcggcggctactttaagatcatcaaccaagccgtgccgggagcactccgcaag
ctcgggtatagccaagcgcagatcgcagagatcgaagcttacgcggttggacatgcctcg
ttggctcaggcgcccaatatcaatcacaccagcctcaagacaaagggtttcgatgatgcg
gccatcagccggatcgaagccggactggaaagcgcattcgacatcaagttcgtcttcaac
aagtggacccttggtgaggaattcctgaccggaaaactcggtgtgcctgccgaaagtctc
gttgacccgaagtttgatttgctgagccatcttggatttacggcgaaagaaatcgaagcg
gccaacgatcacgtctgcggtgcgatgactctggaaggagccccacacctcaaggctgag
cacttgccaatctttgactgcgccaacccatgcggacgtacgggcaaacgctacctttcg
gtcaacagccacatcgacatgatggccgcagcccagccgttcatttccggcgcgatctct
aaaacgatcaacatgccgaacgatgcgacggtcgaggactgcaagcaggcctacacgcgt
tcttggcggttagctttgaaggcgaacgcactctatcgcgacggctcgaagctctcacag
ccgctcaattctcagttgctcggtgaaacggccgaagagcaggacgaggcggtagaacag
ctcagcagcgagaggccgcaagctttgcgcgcagccgctgcagccgagaagatcgtggaa
cgtctggttccacgcggtcgggaacgcttgccaggccgtcgcaagggctacactcagaag
gcgaccgttggcggacacaaagtctatctaacgacgggcgaatacgaagatggccgtatc
ggcgagatcttcatcgacatgcataaggaaggcgcggctttccgctcgttgatgaacaac
ttcgcaatcgccatttcgctgggcctgcaatacggcgtgccgctcgatgagtacgttgat
gcctttacgttcacacgcttcgagcctgctggcttggtgcagggcaatgaaacaatcaag
aacgcgaccagtgttctcgattacttgttccgcgagcttgccgtctcttaccttggccgc
aatgacctcgcgcatgctgaccctggtgagatttcagctacggcactcggcggcaaagaa
gcggaatccgaaacgccatcggtgcccgcggctcaaatcgtgtcgcatgggttcacgcgt
ggtgctctcgtgggtcgtatcggcccccgtgacagctcaactgtgcagctcgcaccgagc
gacgtaacaacggcttattccggctcgggtgtgaatgatggcggtacgcagttgtttgct
cgtcaaaccatcgaaacatcccgcgtggtcaccgaaggtgctctggcgcttaagccggat
ctggtgtccgatcggatcacggaggcgcgcatcaaaggctacgaaggcgaagcttgcggc
tcttgcggcaacttcactctggtgcgcaacggtacctgcctgaagtgcaacacatgcggc
ggaaccagcggctgctcgtaa

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