Candidatus Filomicrobium marinum Y: BN1229_v1_2818
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Entry
BN1229_v1_2818 CDS
T03857
Name
(GenBank) HU, DNA-binding transcriptional regulator, beta subunit (modular protein)
KO
K03530
DNA-binding protein HU-beta
Organism
fiy
Candidatus Filomicrobium marinum Y
Brite
KEGG Orthology (KO) [BR:
fiy00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
fiy03032
]
BN1229_v1_2818
03036 Chromosome and associated proteins [BR:
fiy03036
]
BN1229_v1_2818
03400 DNA repair and recombination proteins [BR:
fiy03400
]
BN1229_v1_2818
DNA replication proteins [BR:
fiy03032
]
Prokaryotic type
DNA Replication Initiation Factors
Initiation factors (bacterial)
BN1229_v1_2818
Chromosome and associated proteins [BR:
fiy03036
]
Prokaryotic type
Nucleoid associated proteins
HU (heat unstable protein)
BN1229_v1_2818
DNA repair and recombination proteins [BR:
fiy03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHIIR (short-homology-independent illegitimate recombination)
Supressor
BN1229_v1_2818
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Bac_DNA_binding
HU-HIG
HU-CCDC81_bac_2
HU-CCDC81_euk_1
HU-CCDC81_euk_2
2C_adapt
RGP
Motif
Other DBs
NCBI-ProteinID:
CPR20907
UniProt:
A0A0D6JIC4
LinkDB
All DBs
Position
1:2737835..2738248
Genome browser
AA seq
137 aa
AA seq
DB search
MYYLLTTAYFQRFLRPLSRTDQEAPGEVIGNVLIAIRVQRESRDWKAMSKKDLIDAIAKE
CDLTKEKAGSAVDAMLSHIKSSMKKGEEVRIPDFGTFKVTKRAARDGRNPLTGETIKIKA
SKVAKFTPSKGLKDLLN
NT seq
414 nt
NT seq
+upstream
nt +downstream
nt
gtgtattacctcttgacgaccgcctattttcagcgctttttgcgacctctgtcacgtaca
gatcaagaagcaccaggcgaagtcatcggtaatgtcctgatcgcaattcgggtgcagcgt
gaatcaagggattggaaagcaatgagcaagaaagacctcatcgacgccatcgccaaagaa
tgtgatttgaccaaggagaaggcgggctcggctgtcgacgcgatgctttcgcacatcaag
tcgtcaatgaagaagggcgaagaggtacgcatccctgattttggaaccttcaaggtaaca
aagcgcgcggctcgcgacggccgcaatccgcttaccggcgagaccatcaagatcaaggct
tcgaaggtggccaagttcaccccttcgaagggcctgaaggatctgctcaactaa
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