Candidatus Filomicrobium marinum Y: BN1229_v1_2898
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Entry
BN1229_v1_2898 CDS
T03857
Symbol
rpoZ
Name
(GenBank) DNA-directed RNA polymerase subunit omega
KO
K03060
DNA-directed RNA polymerase subunit omega [EC:
2.7.7.6
]
Organism
fiy
Candidatus Filomicrobium marinum Y
Pathway
fiy03020
RNA polymerase
Brite
KEGG Orthology (KO) [BR:
fiy00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
BN1229_v1_2898 (rpoZ)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
fiy03021
]
BN1229_v1_2898 (rpoZ)
03400 DNA repair and recombination proteins [BR:
fiy03400
]
BN1229_v1_2898 (rpoZ)
Enzymes [BR:
fiy01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
BN1229_v1_2898 (rpoZ)
Transcription machinery [BR:
fiy03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Core subunits
BN1229_v1_2898 (rpoZ)
DNA repair and recombination proteins [BR:
fiy03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
DNA-directed RNA polymerase complex (RNAP)
BN1229_v1_2898 (rpoZ)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNA_pol_Rpb6
Motif
Other DBs
NCBI-ProteinID:
CPR21090
UniProt:
A0A0D6JIK8
LinkDB
All DBs
Position
1:2828253..2828678
Genome browser
AA seq
141 aa
AA seq
DB search
MARVTVEDCVDKIPNRFELVLLAAHRARNISGGSSITIDPDNDKNPVIALREIAEETIPP
EDMREGLIHTLQRNVEVDEPEAGAAPVLAVERRAPMLGRDDQSSDNVVDVLTEEQLLRGL
ETMTPMEPSASGGNGPRDRGR
NT seq
426 nt
NT seq
+upstream
nt +downstream
nt
atggcacgcgtcaccgttgaggattgcgtcgataaaatccctaaccgctttgagcttgtc
ttgctcgcggctcaccgcgctcgcaacatttcgggcggcagctcgattacgattgatccc
gataacgacaagaatccggttatcgcacttcgtgaaattgcggaagaaacgattcctccc
gaggacatgcgcgaaggtcttatccacacgttgcagcgtaacgtggaagtcgacgaaccc
gaagccggcgcggcaccggtgctcgcagttgagcgacgcgcgccaatgttgggtcgcgat
gatcaatcgagcgacaacgtcgttgatgttttgacggaagagcagcttctgcgcgggctt
gagaccatgacccctatggagccatcagcctccggcggcaatgggcctcgtgatcgcggc
cgttaa
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