Candidatus Filomicrobium marinum Y: BN1229_v1_2903
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Entry
BN1229_v1_2903 CDS
T03857
Symbol
rnc
Name
(GenBank) Ribonuclease 3
KO
K03685
ribonuclease III [EC:
3.1.26.3
]
Organism
fiy
Candidatus Filomicrobium marinum Y
Brite
KEGG Orthology (KO) [BR:
fiy00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
fiy03019
]
BN1229_v1_2903 (rnc)
03009 Ribosome biogenesis [BR:
fiy03009
]
BN1229_v1_2903 (rnc)
03036 Chromosome and associated proteins [BR:
fiy03036
]
BN1229_v1_2903 (rnc)
Enzymes [BR:
fiy01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.26 Endoribonucleases producing 5'-phosphomonoesters
3.1.26.3 ribonuclease III
BN1229_v1_2903 (rnc)
Messenger RNA biogenesis [BR:
fiy03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Ribonucreases
BN1229_v1_2903 (rnc)
Ribosome biogenesis [BR:
fiy03009
]
Eukaryotic type
90S particles
RNase
BN1229_v1_2903 (rnc)
Prokaryotic type
rRNA processing factors
BN1229_v1_2903 (rnc)
Chromosome and associated proteins [BR:
fiy03036
]
Eukaryotic type
Gene silencing
microRNA pathway
Microprocessor complex
BN1229_v1_2903 (rnc)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Ribonucleas_3_3
Ribonuclease_3
dsrm
DND1_DSRM
Motif
Other DBs
NCBI-ProteinID:
CPR21101
UniProt:
A0A0D6JIL3
LinkDB
All DBs
Position
1:2833764..2834501
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AA seq
245 aa
AA seq
DB search
MLAYLTGRMIKKNKDLKALETALGYKFKSHDLLRCALTHSSARSVDADTDDNERLEFIGD
RVLGLVMAELLGETMPTAREGDLARRFNQLVRRETCATVARQINLGRYLILSPSESDNGG
RDKDTILADAMEALLAAIFLDGGFPKARATVRSLWEPQCRQPSCSDQDAKSALQEWAQGR
GMPLPRYVEISRTGPDHAPVFIAEVQIDGTEPGRGEGPSKRAAEQAAASSVLQREGVRRV
TNDNA
NT seq
738 nt
NT seq
+upstream
nt +downstream
nt
atgctggcctacttaactggccgcatgatcaaaaagaacaaagacctgaaggcgcttgaa
acggcgctgggctataaatttaagtcgcatgatttgctgcgctgcgcgttgacgcactca
agtgcgcgcagcgtggacgccgataccgacgataacgaacgcctcgaatttattggagat
cgagtgctcgggctggtgatggccgaattgctcggcgaaacgatgccgaccgcccgcgag
ggcgatcttgcacgccgattcaatcaactcgtacgccgtgaaacctgcgccaccgtagcg
cgacagataaatctcggacgctaccttattctttctccgagcgaatccgacaatggcggg
cgtgacaaggacacgattttggccgatgccatggaagccctgcttgctgcaatttttctc
gacggtggctttcctaaggcccgcgcgaccgtgcgcagcctatgggagccacagtgccgt
caaccatcatgtagcgaccaggacgcgaagtctgcacttcaggagtgggcacaaggccgc
ggaatgccgttgccgcgctatgtggagatttctcggaccggccccgatcacgcacccgtt
ttcatagcggaagtacaaatcgacggcactgagccgggccgtggcgaaggcccatccaag
cgcgcagccgaacaggctgcggcgagttctgttttgcagcgcgaaggcgtgcggcgggta
accaatgacaatgcctaa
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integrated database retrieval system