Candidatus Filomicrobium marinum Y: BN1229_v1_2944
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Entry
BN1229_v1_2944 CDS
T03857
Symbol
bamA
Name
(GenBank) Outer membrane protein assembly factor BamA
KO
K07277
outer membrane protein insertion porin family
Organism
fiy
Candidatus Filomicrobium marinum Y
Brite
KEGG Orthology (KO) [BR:
fiy00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03029 Mitochondrial biogenesis [BR:
fiy03029
]
BN1229_v1_2944 (bamA)
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
fiy02000
]
BN1229_v1_2944 (bamA)
Mitochondrial biogenesis [BR:
fiy03029
]
Mitochondrial protein import machinery
Outer membrane
TOB/SAM complex
BN1229_v1_2944 (bamA)
Transporters [BR:
fiy02000
]
Other transporters
Pores ion channels [TC:
1
]
BN1229_v1_2944 (bamA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Omp85
POTRA
POTRA_1
Antig_Caf1
Motif
Other DBs
NCBI-ProteinID:
CPR21197
UniProt:
A0A0D6JHW6
LinkDB
All DBs
Position
1:2877561..2879933
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AA seq
790 aa
AA seq
DB search
MSQYRIMSLGALRVALSLFLTAFVVISVDAVGFSTPAHAQVVVSEIQVIGNRRVEPETVR
SYLKFTTGDVYDAGRVDQSLRALFATGLFADVEIFRDGNVVRVRVEENPVINQVAFEGNS
EVDTNTLQAEVQLKPRSIYTRARVQADVQRILDVYSRQGRYAANVEPKIIELEQNRVNLV
FEIMEGSATKVKSINFIGNRAFSDAQLRDIISTTQAGWFDFLSGTSIYDPDRMNLDRELL
RQYYLKNGYADARVTSANAELDRDGSGFFLTFTVEEGELYHFGNIVIDSSLTGLDAASLS
GDLLTYSGDVYNGSLLDKTVERLTLAVAERGFAFARVRPRATPDMYARTIAINYVIDEGP
RVYIERINISGNERTKDHVIRREFRLAEGDAFNPLMVDRAEKRLKALGFFKAVDVKRRPG
SAPDRVVLDVQVTEQSTGELSFGAGYSTAEGVIGDVSISERNLLGNGQYIRLRVGGSIER
AQVDLSFTEPRFLDRNLSAGFDLYHKELDQRDQSGFRSRKSGGQLRLGFPLSEDLWMQTS
YSLSRDQIFDVEDDASLAIKDACGDTVLATNRANCGDGTYWTSSAGTMITYDKRNHPTNP
TSGYYLQGTADFAGLGGDAEYVRVQAEARGYYPVTENITFVSRVVGGHIEGWGDEDVRVL
DQFFRGGETVRGFDRSGFGPRDARTGDALGGKTYWAATAELRFPIPFVPEELGLGGAVFA
DAGSLFNASQHVKDILGNNLEDDASVRASVGASLLWNSPVGPLRVDFSKVLASEEYDDEQ
WFRFGASSKF
NT seq
2373 nt
NT seq
+upstream
nt +downstream
nt
atgtctcagtatcggatcatgtcgttgggggccctacgcgtcgctctttcactgttcttg
actgcgttcgtagtcatcagtgtcgatgcagtaggattttcgactccggcgcatgcgcaa
gtcgttgtcagcgaaattcaagttattggtaatcggcgtgtcgaacccgagacggttcgg
tcgtacttgaagttcacgacgggtgatgtctacgacgctgggcgcgtcgatcagtctttg
cgcgcacttttcgcgacgggactgtttgcagacgttgagattttccgtgacggcaatgtg
gttcgggtccgggtcgaagaaaaccctgtgatcaaccaagttgccttcgaaggtaactcc
gaagtcgataccaacactctccaagccgaagttcagctgaagccgcgctcgatctatacg
cgcgctcgcgttcaggctgacgttcagcgcatccttgacgtctatagccgtcagggccga
tatgccgctaacgtcgagccgaaaatcatcgaacttgagcagaaccgtgtgaatctcgtt
ttcgagatcatggaaggttccgcgacgaaggtgaagagcatcaacttcatcggcaaccgc
gccttcagtgacgcgcagctgcgcgacatcatttctacgacgcaggctggctggttcgat
ttcctatccggcaccagcatctacgatccagatcgcatgaatctcgaccgtgagcttctg
cgtcagtattacctgaagaacggatatgccgacgcccgcgtgacttcagctaacgccgaa
ctcgatcgcgacggttcaggtttcttcctgaccttcacggttgaagagggcgagctctat
cacttcggcaatatcgtgatcgacagctcgctcacggggttggatgctgcgtccctgagc
ggcgacctgctgacctatagcggcgacgtctataacggctcgctgctcgacaagaccgtt
gagcgtttgacccttgctgtcgcggaacgtggctttgcctttgctcgtgtccgtccccgc
gccacacccgacatgtacgctcgcacgatcgcgatcaactatgtgatcgacgaaggcccg
cgtgtttatatcgaacgtatcaatatctcgggtaacgagcgcacgaaggatcacgttatt
cgtcgtgagttccgtctggccgaaggcgatgcctttaacccgctgatggttgatcgcgcc
gagaagcgtttgaaggcccttggcttcttcaaggccgtcgatgtcaagcgccgcccaggt
tctgcgcccgatcgcgtcgttcttgacgttcaggtaaccgagcagtcgaccggtgagctc
tcgtttggtgccggttactcgacagcggaaggcgtcatcggtgacgtatccatcagtgag
cgcaacctgctcggcaacggtcagtacatccggctccgcgtcggtggctccatcgagcgt
gcccaggttgacttgagcttcacggaaccgcgcttcctcgaccgtaacctgtcggccggc
ttcgacctgtatcacaaggaactcgatcagcgcgatcagtccggtttccggtctcgtaag
agcggcggtcagctgcgccttggcttcccgctgtcggaagatctctggatgcagaccagc
tactcgctgtcgcgcgatcagatcttcgacgtggaagatgacgcatcgctggcgatcaag
gacgcatgcggtgatacggtcctggcgacaaaccgagctaactgtggcgacggtacgtac
tggacttcgtccgccggcacgatgatcacctacgataagcgtaatcacccaaccaaccca
acgagcggctactacctgcaaggtacggcagacttcgctggcctcggtggcgacgcagaa
tacgtccgcgtccaggctgaagcccgtggctactacccggttacggaaaacatcaccttc
gtcagccgcgttgttggcggccatatcgaaggctggggtgacgaggatgtccgcgtgctc
gaccagttcttccgtggtggtgagaccgtccgtggctttgaccgctcgggtttcggacca
cgtgacgcacgaaccggtgacgcgctcggcggtaagacatactgggcggcaactgcggaa
ctccgcttcccgatcccgttcgtgcctgaagagctcggacttggtggtgcagtcttcgcc
gacgctggttcgctctttaatgcctcccagcacgtgaaggacattttgggcaacaacctt
gaagatgacgcctcggtacgtgcttccgttggtgcaagccttctgtggaattcgcccgta
ggtccgctgcgtgtcgacttctccaaagttctcgcatcggaagagtacgacgacgagcag
tggttccgcttcggcgcctcatcgaaattctaa
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